Os04g0623300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Flavin-containing monamine oxidase family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0623300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Flavin-containing monamine oxidase family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.99 | 0.446 | 12 | -1.6 | 1.45 | 0.59 | 0.357 | -3.65 | -0.382 | 12.6 | 20.36 | 270 | -- | -- |
| 98.83 | 0.467 | 11.9 | -0.901 | 1.4 | 0.49 | -0.159 | -- | -0.19 | 12.9 | 15.95 | 662 | -- | -- |
| 89.76 | 0.441 | 12 | -1.59 | 1.52 | 0.583 | -- | -3.46 | -0.369 | 12.5 | 20.02 | 407 | -- | -- |
| 96.25 | 0.457 | 11.9 | -1.08 | 1.56 | 0.545 | -- | -- | -0.241 | 13 | 14.73 | 5801 | -- | -- |
| 174.89 | 0.619 | 12 | -1.73 | -- | 1.85 | -- | -3.38 | -0.57 | -- | 21.02 | 3 | -- | -- |
| 101.49 | 0.472 | 11.9 | -0.803 | 1.54 | -- | -0.115 | -- | -0.116 | 13 | -- | -- | -- | -- |
| 101.54 | 0.472 | 11.9 | -0.807 | 1.54 | -- | -- | -- | -0.117 | 13 | -- | -- | -- | -- |
| 184.07 | 0.635 | 12 | -1.22 | -- | 1.82 | -- | -- | -0.426 | -- | 17.9 | 6 | -- | -- |
| 110.53 | 0.49 | 11.8 | -- | 1.53 | -0.423 | -- | -- | 0.129 | 13 | 20.7 | 47520 | -- | -- |
| 249.18 | 0.738 | 11.9 | -0.865 | -- | -- | -- | -- | -0.147 | -- | -- | -- | -- | -- |
| 118.71 | 0.51 | 11.9 | -- | 1.55 | -- | -- | -- | -0.0272 | 13 | -- | -- | -- | -- |
| 217.27 | 0.687 | 11.9 | -- | -- | 1.41 | -- | -- | -0.184 | -- | 24.1 | 3 | -- | -- |
| 268.91 | 0.765 | 11.9 | -- | -- | -- | -- | -- | -0.0509 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.02 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 20 |
| 22 | 84.55 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 26 | 84.69 | wind | 9.0 | 270 | < th | dose dependent | rect. | 15 | 13 |
| 33 | 84.89 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 13 |
| 50 | 85.34 | humidity | 90.0 | 90 | < th | dose independent | rect. | 6 | 18 |
| 57 | 85.47 | wind | 9.0 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 67 | 85.91 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 13 |
| 71 | 85.96 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 9 | 19 |
| 74 | 86.06 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 113 | 86.73 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 114 | 86.74 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 19 |
| 134 | 87.04 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 22 |
| 147 | 87.16 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 4 |
| 152 | 87.19 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 13 |
| 153 | 87.20 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 158 | 87.22 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 169 | 87.30 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 172 | 87.35 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 178 | 87.36 | humidity | 80.0 | 270 | > th | dose independent | rect. | 8 | 21 |
| 192 | 87.45 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 19 |
| 199 | 87.50 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 20 | 2 |
| 250 | 87.80 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 266 | 87.88 | humidity | 90.0 | 90 | < th | dose independent | rect. | 20 | 13 |
| 267 | 87.88 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 268 | 87.88 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 281 | 87.93 | temperature | 20.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 322 | 88.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 13 |
| 323 | 88.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 13 |
| 328 | 88.18 | wind | 9.0 | 720 | < th | dose independent | rect. | 8 | 12 |
| 329 | 88.18 | wind | 9.0 | 720 | < th | dose independent | rect. | 7 | 14 |
| 334 | 88.19 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 14 |
| 335 | 88.19 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 14 |
| 352 | 88.24 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 355 | 88.24 | wind | 7.0 | 270 | < th | dose dependent | rect. | 11 | 17 |
| 361 | 88.25 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 376 | 88.29 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 386 | 88.31 | wind | 9.0 | 720 | < th | dose independent | rect. | 8 | 19 |
| 389 | 88.31 | wind | 9.0 | 270 | < th | dose dependent | rect. | 9 | 10 |
| 394 | 88.32 | wind | 9.0 | 720 | < th | dose independent | rect. | 24 | 20 |
| 404 | 88.35 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 421 | 88.36 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 9 | 15 |
| 429 | 88.37 | atmosphere | 1005.0 | 14400 | > th | dose dependent | sin | 16 | NA |
| 463 | 88.39 | wind | 9.0 | 720 | < th | dose independent | rect. | 8 | 21 |
| 482 | 88.40 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 519 | 88.42 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 590 | 88.46 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 17 | 19 |
| 643 | 88.49 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 17 | 10 |
| 666 | 88.50 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 667 | 88.50 | atmosphere | 1005.0 | 14400 | > th | dose dependent | no | NA | NA |
| 690 | 88.51 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 705 | 88.51 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 731 | 88.53 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 2 | 4 |
| 745 | 88.54 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 7 |
| 797 | 88.57 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 24 | 20 |
| 839 | 88.61 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 7 |
| 842 | 88.61 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 11 |
| 904 | 88.67 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 923 | 88.69 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 947 | 88.71 | temperature | 20.0 | 90 | > th | dose independent | rect. | 6 | 19 |
| 966 | 88.73 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 982 | 88.75 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 996 | 88.76 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 20 | 21 |