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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0621100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.94 (0.025) R2 : 0.0127
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.128 (0.0527) R2dN8 : 0.0164 R2N8 : 0.0127
σ : 0.472
deviance : 102.08
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
94.48 0.457 2.97 -0.0878 0.0904 -0.45 -0.312 2.06 0.109 23.3 1.028 16 -- --
97.95 0.461 2.94 -0.009 0.0959 -0.293 -0.476 -- 0.135 0.301 1.001 16 -- --
94.86 0.454 2.97 -0.0813 0.0929 -0.464 -- 2.18 0.107 22.4 1.016 16 -- --
98.89 0.463 2.95 0.0085 0.0909 -0.301 -- -- 0.134 23.4 1.03 16 -- --
95.41 0.455 2.97 -0.078 -- -0.468 -- 2.15 0.11 -- 1.03 16 -- --
99.95 0.469 2.95 0.0295 0.138 -- -0.478 -- 0.128 1.73 -- -- -- --
100.86 0.47 2.95 0.0448 0.138 -- -- -- 0.13 1.73 -- -- -- --
99.4 0.464 2.94 0.00834 -- -0.319 -- -- 0.135 -- 1.039 16 -- --
98.9 0.463 2.95 -- 0.0908 -0.302 -- -- 0.133 23.4 1.038 16 -- --
102.02 0.472 2.94 0.0504 -- -- -- -- 0.133 -- -- -- -- --
100.91 0.47 2.95 -- 0.139 -- -- -- 0.125 1.73 -- -- -- --
99.41 0.464 2.94 -- -- -0.32 -- -- 0.134 -- 1.042 16 -- --
102.08 0.472 2.94 -- -- -- -- -- 0.128 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 80.27 temperature 20.0 30 > th dose dependent rect. 2 1
2 80.36 atmosphere 1005.0 30 > th dose dependent rect. 2 1
4 80.42 temperature 20.0 30 > th dose independent rect. 2 1
5 80.42 wind 3.0 30 < th dose dependent rect. 2 1
6 80.45 atmosphere 1005.0 30 > th dose independent rect. 2 1
10 80.50 wind 3.0 30 < th dose independent rect. 2 1
16 80.59 humidity 80.0 30 > th dose independent rect. 2 1
19 80.63 temperature 10.0 30 > th dose independent rect. 2 1
21 80.63 temperature 30.0 30 < th dose independent rect. 2 1
22 80.63 humidity 50.0 30 > th dose independent rect. 2 1
26 80.63 atmosphere 1010.0 30 < th dose independent rect. 2 1
28 80.63 radiation 1.0 30 < th dose independent rect. 2 1
33 80.63 precipitation 0.1 30 < th dose independent rect. 2 1
34 80.63 temperature 10.0 30 > th dose independent rect. 3 23
35 80.63 humidity 50.0 30 > th dose dependent rect. 2 1
38 80.63 radiation 1.0 30 < th dose dependent rect. 2 1
43 80.63 precipitation 0.1 30 < th dose dependent rect. 2 1
49 80.98 atmosphere 1015.0 30 < th dose dependent rect. 2 1
51 81.28 wind 9.0 1440 < th dose independent rect. 3 1
52 81.28 temperature 10.0 1440 > th dose independent rect. 3 1
55 81.28 temperature 30.0 1440 < th dose independent rect. 3 1
59 81.28 humidity 50.0 1440 > th dose independent rect. 3 1
68 81.28 atmosphere 995.0 1440 > th dose independent rect. 3 1
69 81.28 radiation 1.0 1440 < th dose independent rect. 3 1
89 81.28 temperature 10.0 1440 > th dose independent rect. 4 23
92 81.28 radiation 1.0 1440 < th dose dependent rect. 3 1
110 81.33 temperature 30.0 30 < th dose dependent rect. 2 1
115 81.63 wind 1.0 30 > th dose independent rect. 2 1
162 82.55 atmosphere 995.0 30 > th dose independent rect. 3 23
169 83.36 precipitation 0.1 30 < th dose independent rect. 3 23
170 83.36 precipitation 0.1 30 < th dose dependent rect. 3 23
171 83.42 wind 9.0 30 < th dose independent rect. 3 23
182 85.50 temperature 25.0 270 > th dose dependent rect. 23 1
186 86.39 temperature 25.0 270 > th dose independent rect. 23 4
187 86.41 temperature 25.0 270 > th dose independent rect. 23 1
189 86.66 temperature 25.0 270 > th dose dependent rect. 23 4
207 88.00 humidity 50.0 30 > th dose independent rect. 3 23
233 89.75 temperature 30.0 30 < th dose independent rect. 3 23
277 90.74 temperature 25.0 270 > th dose independent rect. 20 7
287 91.11 wind 1.0 10 > th dose independent rect. 21 23
309 91.72 temperature 20.0 30 > th dose dependent rect. 20 7
325 92.02 humidity 90.0 90 < th dose independent rect. 2 1
327 92.04 temperature 25.0 270 < th dose independent rect. 19 12
332 92.11 atmosphere 1015.0 30 < th dose independent rect. 3 23
335 92.18 temperature 25.0 270 > th dose independent sin 11 NA
340 92.29 temperature 25.0 270 < th dose independent sin 11 NA
355 92.56 humidity 50.0 720 > th dose independent rect. 21 18
361 92.62 temperature 25.0 30 > th dose dependent rect. 23 1
432 93.42 wind 9.0 30 < th dose dependent rect. 3 23
437 93.47 humidity 50.0 720 < th dose independent rect. 13 1
439 93.48 temperature 25.0 30 > th dose independent rect. 23 1
467 93.64 wind 1.0 30 > th dose independent rect. 3 23
476 93.74 humidity 50.0 720 > th dose independent rect. 6 9
492 93.91 humidity 50.0 720 > th dose independent rect. 14 1
516 94.08 wind 1.0 10 > th dose independent sin 15 NA
591 94.45 temperature 25.0 720 > th dose dependent rect. 18 3
595 94.48 temperature 10.0 270 > th dose dependent rect. 17 10
605 94.54 wind 1.0 10 > th dose independent rect. 21 12
620 94.62 humidity 50.0 720 > th dose independent rect. 3 12
634 94.69 temperature 25.0 720 > th dose dependent rect. 20 1
742 94.92 wind 1.0 720 > th dose independent rect. 15 6
747 94.93 atmosphere 995.0 720 > th dose independent rect. 21 18
759 94.96 precipitation 0.1 720 < th dose independent rect. 15 6
760 94.96 precipitation 0.1 720 < th dose dependent rect. 15 6
761 94.97 precipitation 0.1 720 < th dose independent rect. 3 6
766 94.97 precipitation 0.1 720 < th dose dependent rect. 3 6
785 95.03 humidity 60.0 720 > th dose independent rect. 3 6
788 95.04 precipitation 0.1 720 < th dose independent rect. 21 18
789 95.04 precipitation 0.1 720 < th dose dependent rect. 21 18
795 95.06 temperature 25.0 720 > th dose dependent sin 12 NA
797 95.07 wind 9.0 720 < th dose independent rect. 3 6
798 95.07 temperature 10.0 720 > th dose independent rect. 3 6
800 95.07 atmosphere 995.0 720 > th dose independent rect. 3 6
802 95.07 temperature 10.0 720 > th dose independent rect. 9 18
812 95.10 temperature 10.0 720 > th dose independent rect. 15 6
814 95.10 temperature 10.0 720 > th dose independent rect. 21 18
819 95.12 precipitation 0.1 720 < th dose independent rect. 9 18
822 95.12 precipitation 0.1 720 < th dose dependent rect. 9 18
823 95.13 temperature 25.0 720 < th dose independent rect. 19 6
835 95.17 radiation 40.0 720 < th dose independent rect. 15 6
842 95.18 radiation 20.0 10 < th dose dependent rect. 3 23
846 95.19 wind 9.0 10 < th dose independent rect. 21 23
870 95.25 wind 3.0 30 > th dose dependent rect. 20 1
875 95.27 wind 3.0 10 > th dose independent rect. 20 1
876 95.27 atmosphere 1005.0 10 > th dose independent rect. 20 1
882 95.29 atmosphere 1015.0 720 < th dose independent rect. 3 6
887 95.30 wind 9.0 720 < th dose independent rect. 15 6
888 95.30 atmosphere 1015.0 720 < th dose independent rect. 15 6
893 95.31 humidity 90.0 30 < th dose dependent rect. 20 1
894 95.32 humidity 90.0 10 < th dose independent rect. 20 1
897 95.32 atmosphere 1005.0 10 > th dose dependent rect. 20 1
912 95.34 radiation 10.0 10 < th dose independent rect. 3 23
917 95.35 temperature 30.0 30 < th dose dependent rect. 20 1
923 95.36 wind 7.0 30 < th dose independent rect. 20 1
924 95.36 temperature 20.0 10 > th dose independent rect. 20 1
933 95.37 temperature 10.0 30 > th dose independent rect. 20 1
935 95.37 temperature 10.0 1440 > th dose independent rect. 21 1
938 95.37 temperature 30.0 30 < th dose independent rect. 20 1
939 95.37 temperature 30.0 1440 < th dose independent rect. 21 1
943 95.37 humidity 50.0 30 > th dose independent rect. 20 1
946 95.37 humidity 50.0 1440 > th dose independent rect. 21 1
952 95.37 atmosphere 995.0 30 > th dose independent rect. 20 1
954 95.37 atmosphere 995.0 1440 > th dose independent rect. 21 1
955 95.37 atmosphere 1010.0 30 < th dose independent rect. 20 1
957 95.37 radiation 1.0 30 < th dose independent rect. 20 1
962 95.37 radiation 1.0 1440 < th dose independent rect. 21 1
982 95.37 precipitation 0.1 30 < th dose independent rect. 20 1
984 95.37 temperature 10.0 30 > th dose independent rect. 21 23
985 95.37 temperature 10.0 1440 > th dose independent rect. 22 23
988 95.37 temperature 10.0 30 > th dose dependent rect. 20 1
989 95.37 radiation 1.0 30 < th dose dependent rect. 20 1
994 95.37 radiation 10.0 1440 < th dose dependent rect. 21 1
998 95.37 precipitation 0.1 30 < th dose dependent rect. 20 1