Os04g0620200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Remorin, C-terminal region domain containing protein.
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Os04g0620200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Remorin, C-terminal region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 493.77 | 1.04 | 3.82 | -1.56 | 0.314 | 1.95 | -1.34 | 4.33 | 0.477 | 9.83 | 19.56 | 4511 | -- | -- |
| 501.02 | 1.04 | 3.66 | -1.09 | 0.222 | 0.921 | -1.62 | -- | 0.661 | 10.1 | 26.2 | 3163 | -- | -- |
| 500.27 | 1.04 | 3.82 | -1.57 | 0.316 | 2.04 | -- | 4.51 | 0.476 | 10.5 | 19.3 | 4623 | -- | -- |
| 506.11 | 1.05 | 3.68 | -1.27 | 0.252 | 0.928 | -- | -- | 0.595 | 9.93 | 26.1 | 3141 | -- | -- |
| 506.37 | 1.05 | 3.84 | -1.58 | -- | 2.11 | -- | 4.74 | 0.47 | -- | 19.2 | 4643 | -- | -- |
| 529.28 | 1.08 | 3.71 | -1.63 | 0.32 | -- | -1.31 | -- | 0.355 | 9.97 | -- | -- | -- | -- |
| 535.76 | 1.08 | 3.71 | -1.68 | 0.327 | -- | -- | -- | 0.354 | 10.7 | -- | -- | -- | -- |
| 509.79 | 1.05 | 3.68 | -1.29 | -- | 0.94 | -- | -- | 0.565 | -- | 26.22 | 3157 | -- | -- |
| 546.48 | 1.09 | 3.62 | -- | 0.238 | 1.26 | -- | -- | 0.771 | 10.6 | 26.1 | 3148 | -- | -- |
| 542.35 | 1.09 | 3.72 | -1.68 | -- | -- | -- | -- | 0.352 | -- | -- | -- | -- | -- |
| 610.01 | 1.16 | 3.67 | -- | 0.34 | -- | -- | -- | 0.541 | 11 | -- | -- | -- | -- |
| 549.94 | 1.09 | 3.63 | -- | -- | 1.28 | -- | -- | 0.778 | -- | 26.29 | 3159 | -- | -- |
| 617.23 | 1.16 | 3.68 | -- | -- | -- | -- | -- | 0.539 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 491.04 | temperature | 20 | 4320 | < th | dose dependent | rect. | 22 | 2 |
| 5 | 492.30 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 20 | 493.48 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 25 | 493.67 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 7 |
| 33 | 493.81 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 7 |
| 38 | 493.89 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 11 |
| 46 | 493.97 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 13 |
| 79 | 494.18 | temperature | 20 | 4320 | < th | dose independent | sin | 12 | NA |
| 95 | 494.22 | temperature | 20 | 4320 | < th | dose dependent | sin | 15 | NA |
| 96 | 494.23 | temperature | 20 | 4320 | > th | dose independent | sin | 12 | NA |
| 312 | 494.91 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 23 |
| 350 | 495.02 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 23 |
| 367 | 495.05 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 20 |
| 369 | 495.05 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 383 | 495.07 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 23 |
| 385 | 495.08 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 396 | 495.09 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 420 | 495.14 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 427 | 495.14 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 23 |
| 438 | 495.16 | temperature | 20 | 4320 | > th | dose independent | rect. | 5 | 23 |
| 504 | 495.36 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 3 |
| 536 | 495.46 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 3 |
| 595 | 495.64 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 748 | 496.04 | temperature | 20 | 4320 | < th | dose dependent | no | NA | NA |
| 753 | 496.05 | humidity | 60 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 772 | 496.15 | temperature | 20 | 4320 | < th | dose dependent | rect. | 2 | 23 |
| 801 | 496.29 | temperature | 20 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 802 | 496.29 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 958 | 497.16 | wind | 3 | 90 | < th | dose dependent | sin | 3 | NA |