Os04g0617200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0617200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 253.92 | 0.749 | 6.91 | 1.99 | 3.8 | -2.66 | -2.06 | -4.78 | 0.681 | 22.3 | 25.11 | 634 | -- | -- |
| 284.22 | 0.785 | 6.97 | 1.17 | 3.75 | -2.22 | -1.37 | -- | 0.636 | 22.2 | 27.75 | 969 | -- | -- |
| 266.76 | 0.761 | 6.93 | 1.95 | 3.91 | -2.59 | -- | -4.01 | 0.652 | 22.4 | 25.2 | 495 | -- | -- |
| 286.12 | 0.788 | 7.01 | 1.29 | 3.81 | -2.23 | -- | -- | 0.49 | 22.4 | 25.79 | 612 | -- | -- |
| 967.76 | 1.45 | 6.97 | 1.02 | -- | -5.07 | -- | -2.56 | 0.111 | -- | 29.7 | 774 | -- | -- |
| 357.65 | 0.887 | 6.91 | 1.81 | 4.15 | -- | -1.21 | -- | 0.987 | 22.2 | -- | -- | -- | -- |
| 363.52 | 0.893 | 6.91 | 1.86 | 4.15 | -- | -- | -- | 0.99 | 22.2 | -- | -- | -- | -- |
| 978.3 | 1.46 | 7.04 | 0.523 | -- | -5.13 | -- | -- | 0.00492 | -- | 30.09 | 774 | -- | -- |
| 301.17 | 0.808 | 7.08 | -- | 4.1 | -2.02 | -- | -- | 0.222 | 22.2 | 59.82 | 25429 | -- | -- |
| 1411.28 | 1.76 | 6.8 | 1.92 | -- | -- | -- | -- | 0.999 | -- | -- | -- | -- | -- |
| 454.71 | 0.997 | 6.95 | -- | 4.16 | -- | -- | -- | 0.783 | 22.3 | -- | -- | -- | -- |
| 984.2 | 1.46 | 7.04 | -- | -- | -5.33 | -- | -- | -0.0857 | -- | 30.07 | 778 | -- | -- |
| 1508.68 | 1.81 | 6.84 | -- | -- | -- | -- | -- | 0.786 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 250.12 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 3 | 251.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 4 | 252.09 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 21 |
| 16 | 253.08 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 17 |
| 22 | 253.38 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 15 |
| 29 | 253.76 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 22 |
| 43 | 254.07 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 71 | 254.74 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 78 | 254.89 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 152 | 257.81 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 173 | 258.47 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 263 | 261.17 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 6 |
| 307 | 262.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 8 |
| 470 | 266.02 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 9 |
| 855 | 270.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 920 | 270.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 6 |
| 926 | 270.76 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 23 |