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Os04g0615500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF794, plant family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0165) R2 : 0.864
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.28 (0.0481) R2dC : 0.292 R2C : 0.585
β3 : 1.31 (0.051) R2dE : 0.272 R2E : 0.568
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.108 (0.0348) R2dN8 : 0.00323 R2N8 : 0.00774
σ : 0.31
deviance : 44.21
__
_____
C
peak time of C : 14.9
E
wheather : wind
threshold : 8.9
memory length : 292
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 5.65
open length of G : 20.1

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
41.56 0.303 11.6 -0.304 1.29 1.34 -0.507 0.575 -0.133 14.9 8.263 286 5.85 20
42.22 0.303 11.6 -0.273 1.29 1.34 -0.397 -- -0.123 14.8 8.3 286 5.85 20
42.31 0.303 11.6 -0.291 1.29 1.32 -- 0.453 -0.129 14.8 8.3 289 5.85 20
42.43 0.303 11.6 -0.269 1.28 1.33 -- -- -0.127 14.9 8.503 291 5.76 20
91.49 0.445 11.7 -0.339 -- 2 -- 0.0637 -0.111 -- 9.735 321 5.3 19
78.17 0.414 11.7 -0.28 2.11 -- 0.0924 -- -0.186 16.2 -- -- -- --
78.19 0.414 11.7 -0.279 2.11 -- -- -- -0.185 16.2 -- -- -- --
69.63 0.389 11.7 -0.236 -- 2.05 -- -- -0.168 -- 45.06 484 4.28 17
44.21 0.31 11.7 -- 1.28 1.31 -- -- -0.108 14.9 8.9 292 5.65 20.1
318.71 0.834 11.7 -0.364 -- -- -- -- -0.241 -- -- -- -- --
80.25 0.419 11.7 -- 2.11 -- -- -- -0.154 16.2 -- -- -- --
71.03 0.393 11.6 -- -- 2.09 -- -- -0.128 -- 66.51 482 4.34 16.9
322.21 0.838 11.7 -- -- -- -- -- -0.201 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 42.29 wind 9.0 270 < th dose independent rect. 6 20
2 42.29 temperature 10.0 270 > th dose dependent rect. 2 4
3 42.35 precipitation 0.1 270 < th dose independent rect. 2 4
4 42.35 precipitation 0.1 270 < th dose dependent rect. 2 4
5 42.43 radiation 10.0 270 < th dose independent rect. 1 6
6 42.71 radiation 10.0 270 < th dose independent rect. 2 4
7 42.77 wind 7.0 270 < th dose independent rect. 2 4
8 42.82 wind 9.0 270 < th dose independent rect. 5 22
9 42.83 atmosphere 1010.0 270 < th dose independent rect. 2 4
11 42.93 temperature 10.0 270 > th dose independent rect. 2 4
13 42.93 temperature 30.0 270 < th dose independent rect. 2 4
14 42.93 humidity 50.0 270 > th dose independent rect. 2 4
17 42.93 atmosphere 995.0 270 > th dose independent rect. 2 4
22 42.93 temperature 10.0 270 > th dose independent rect. 6 20
23 42.95 radiation 40.0 270 < th dose dependent rect. 2 4
25 42.98 precipitation 0.1 270 < th dose independent rect. 3 2
26 42.98 precipitation 0.1 270 < th dose dependent rect. 3 2
35 43.37 precipitation 0.1 270 < th dose independent rect. 6 20
36 43.37 precipitation 0.1 270 < th dose dependent rect. 6 20
37 43.46 wind 7.0 270 < th dose independent rect. 3 2
39 43.52 radiation 20.0 270 < th dose dependent rect. 1 8
40 43.54 wind 9.0 270 < th dose independent rect. 7 18
41 43.56 wind 9.0 270 < th dose dependent rect. 2 4
42 43.59 precipitation 0.1 270 < th dose independent rect. 1 6
43 43.59 radiation 1.0 270 < th dose dependent rect. 3 2
44 43.59 precipitation 0.1 270 < th dose dependent rect. 1 6
45 43.60 radiation 1.0 270 < th dose independent rect. 3 2
52 43.61 temperature 10.0 270 > th dose independent rect. 3 2
54 43.61 temperature 30.0 270 < th dose independent rect. 3 2
55 43.61 humidity 50.0 270 > th dose independent rect. 3 2
58 43.61 atmosphere 995.0 270 > th dose independent rect. 3 2
59 43.61 atmosphere 1010.0 270 < th dose independent rect. 3 2
64 43.61 temperature 10.0 270 > th dose independent rect. 5 22
66 43.69 temperature 10.0 270 > th dose dependent rect. 3 2
68 43.79 atmosphere 1010.0 270 < th dose independent rect. 1 6
75 44.01 wind 7.0 270 < th dose independent rect. 1 6
76 44.01 humidity 70.0 270 > th dose independent rect. 1 6
77 44.02 radiation 40.0 270 < th dose dependent rect. 15 15
80 44.10 wind 9.0 270 < th dose dependent rect. 3 2
83 44.12 temperature 10.0 270 > th dose independent rect. 1 6
85 44.12 temperature 30.0 270 < th dose independent rect. 1 6
86 44.12 humidity 50.0 270 > th dose independent rect. 1 6
88 44.12 atmosphere 995.0 270 > th dose independent rect. 1 6
91 44.12 temperature 10.0 270 > th dose independent rect. 7 18
96 44.28 radiation 30.0 270 < th dose independent rect. 15 15
97 44.29 humidity 50.0 270 > th dose dependent rect. 2 4
101 44.39 precipitation 0.1 270 < th dose independent rect. 7 18
102 44.39 precipitation 0.1 270 < th dose dependent rect. 7 18
108 44.51 humidity 50.0 270 > th dose dependent rect. 3 2
128 44.62 radiation 10.0 270 < th dose dependent rect. 2 11
148 44.89 temperature 10.0 270 > th dose dependent rect. 1 6
182 45.17 atmosphere 1015.0 270 < th dose independent rect. 11 10
186 45.28 wind 9.0 270 < th dose independent rect. 21 14
187 45.29 wind 9.0 270 < th dose dependent rect. 1 6
201 45.30 radiation 10.0 270 < th dose dependent rect. 1 18
202 45.31 precipitation 0.1 270 < th dose independent rect. 5 22
203 45.31 precipitation 0.1 270 < th dose dependent rect. 5 22
209 45.47 temperature 15.0 270 > th dose independent rect. 11 10
211 45.50 temperature 10.0 270 > th dose independent rect. 21 14
212 45.50 atmosphere 995.0 270 > th dose independent rect. 21 14
222 45.64 humidity 50.0 270 > th dose dependent rect. 1 6
226 45.69 humidity 50.0 270 > th dose independent rect. 21 14
244 45.94 atmosphere 1015.0 270 < th dose independent rect. 1 20
262 46.18 wind 9.0 270 < th dose independent rect. 6 9
278 46.31 wind 9.0 270 < th dose independent rect. 21 4
279 46.31 temperature 10.0 270 > th dose independent rect. 21 4
280 46.31 temperature 30.0 270 < th dose independent rect. 21 4
281 46.31 humidity 50.0 270 > th dose independent rect. 21 4
284 46.31 atmosphere 995.0 270 > th dose independent rect. 21 4
285 46.31 radiation 1.0 270 < th dose independent rect. 21 4
290 46.31 temperature 10.0 270 > th dose independent rect. 1 20
291 46.31 radiation 1.0 270 < th dose dependent rect. 21 4
310 46.42 precipitation 0.1 270 < th dose independent rect. 21 4
311 46.42 precipitation 0.1 270 < th dose dependent rect. 21 4
332 46.51 precipitation 0.1 270 < th dose independent rect. 6 9
334 46.51 precipitation 0.1 270 < th dose dependent rect. 6 9
352 46.60 radiation 1.0 270 < th dose independent rect. 2 13
355 46.61 precipitation 0.1 270 < th dose independent rect. 1 20
356 46.61 precipitation 0.1 270 < th dose dependent rect. 1 20
366 46.70 temperature 10.0 270 > th dose independent rect. 6 9
367 46.70 atmosphere 1015.0 270 < th dose independent rect. 6 9
368 46.70 temperature 10.0 270 > th dose independent rect. 15 15
373 46.74 wind 1.0 270 > th dose independent rect. 11 10
385 46.83 precipitation 0.1 270 < th dose independent rect. 21 14
386 46.83 precipitation 0.1 270 < th dose dependent rect. 21 14
399 47.00 radiation 1.0 270 < th dose independent rect. 2 17
442 47.23 atmosphere 995.0 270 > th dose independent rect. 6 9
446 47.25 precipitation 0.1 270 < th dose independent rect. 11 10
449 47.25 precipitation 0.1 270 < th dose dependent rect. 11 10
457 47.31 wind 9.0 270 < th dose independent rect. 15 15
467 47.43 wind 9.0 270 < th dose independent rect. 19 7
468 47.43 temperature 10.0 270 > th dose independent rect. 19 7
469 47.43 temperature 30.0 270 < th dose independent rect. 19 7
470 47.43 humidity 50.0 270 > th dose independent rect. 19 7
471 47.43 atmosphere 995.0 270 > th dose independent rect. 19 7
472 47.43 radiation 1.0 270 < th dose independent rect. 19 7
477 47.43 temperature 10.0 270 > th dose independent rect. 2 17
478 47.43 atmosphere 1015.0 270 < th dose independent rect. 2 17
480 47.43 radiation 1.0 270 < th dose dependent rect. 19 7
497 47.54 precipitation 0.1 270 < th dose independent rect. 2 17
498 47.54 precipitation 0.1 270 < th dose dependent rect. 2 17
499 47.55 wind 9.0 270 < th dose independent rect. 1 20
524 47.59 precipitation 0.1 270 < th dose independent rect. 15 15
525 47.59 precipitation 0.1 270 < th dose dependent rect. 15 15
527 47.62 wind 9.0 270 < th dose independent rect. 11 10
528 47.62 radiation 10.0 10 < th dose independent rect. 4 19
529 47.62 humidity 50.0 270 > th dose dependent rect. 21 4
553 47.68 atmosphere 995.0 270 > th dose independent rect. 6 20
561 47.80 precipitation 0.1 270 < th dose independent rect. 19 7
562 47.80 precipitation 0.1 270 < th dose dependent rect. 19 7
565 47.81 humidity 50.0 90 > th dose dependent rect. 21 6
568 47.83 wind 1.0 270 > th dose independent rect. 7 18
570 47.85 atmosphere 995.0 270 > th dose independent rect. 1 19
571 47.85 wind 9.0 10 < th dose dependent rect. 3 5
578 47.93 radiation 10.0 90 < th dose independent rect. 3 19
601 48.12 precipitation 0.1 10 < th dose independent rect. 3 5
604 48.12 precipitation 0.1 10 < th dose dependent rect. 3 5
648 48.35 atmosphere 995.0 270 > th dose independent rect. 15 15
650 48.36 atmosphere 995.0 270 > th dose independent rect. 7 18
658 48.41 wind 9.0 10 < th dose independent rect. 8 19
661 48.42 temperature 10.0 10 > th dose dependent rect. 3 5
676 48.51 wind 9.0 270 < th dose independent rect. 2 17
710 48.54 atmosphere 995.0 270 > th dose independent rect. 2 17
716 48.56 radiation 30.0 10 < th dose independent rect. 3 5
731 48.69 wind 1.0 270 > th dose independent rect. 2 4
743 48.75 wind 5.0 10 < th dose independent rect. 3 5
772 48.92 wind 1.0 270 > th dose independent rect. 6 20
777 48.94 temperature 10.0 10 > th dose independent rect. 3 5
779 48.94 temperature 30.0 10 < th dose independent rect. 3 5
780 48.94 humidity 50.0 10 > th dose independent rect. 3 5
782 48.94 atmosphere 995.0 10 > th dose independent rect. 3 5
783 48.94 atmosphere 1015.0 10 < th dose independent rect. 3 5
784 48.94 temperature 10.0 10 > th dose independent rect. 8 19
837 49.11 wind 1.0 270 > th dose independent rect. 21 4
862 49.17 atmosphere 995.0 270 > th dose dependent rect. 3 2
903 49.27 atmosphere 995.0 270 > th dose dependent rect. 2 4
940 49.31 precipitation 0.1 10 < th dose independent rect. 8 19
941 49.31 precipitation 0.1 10 < th dose dependent rect. 8 19
949 49.34 radiation 20.0 10 < th dose dependent rect. 4 19
960 49.36 radiation 1.0 270 > th dose independent rect. 6 9
995 49.43 wind 9.0 270 < th dose dependent rect. 21 4