Os04g0615100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Lecithine cholesterol acyltransferase-like protein.
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Os04g0615100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Lecithine cholesterol acyltransferase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.67 | 0.281 | 10.2 | 0.683 | 0.201 | -0.399 | -0.55 | 0.441 | 0.227 | 22.8 | 25.6 | 875 | -- | -- |
| 35.86 | 0.279 | 10.3 | 0.564 | 0.19 | -0.372 | -0.451 | -- | 0.186 | 22.9 | 25.59 | 896 | -- | -- |
| 36.7 | 0.282 | 10.3 | 0.608 | 0.205 | -0.376 | -- | 0.0859 | 0.206 | 22.4 | 25.5 | 870 | -- | -- |
| 36.68 | 0.282 | 10.3 | 0.586 | 0.203 | -0.382 | -- | -- | 0.193 | 22.3 | 25.52 | 875 | -- | -- |
| 37.42 | 0.285 | 10.2 | 0.762 | -- | -0.392 | -- | 0.577 | 0.171 | -- | 26.14 | 3669 | -- | -- |
| 39.93 | 0.296 | 10.3 | 0.455 | 0.0439 | -- | -0.5 | -- | 0.0558 | 23.8 | -- | -- | -- | -- |
| 41 | 0.3 | 10.3 | 0.475 | 0.0498 | -- | -- | -- | 0.0584 | 22.3 | -- | -- | -- | -- |
| 37.77 | 0.286 | 10.3 | 0.612 | -- | -0.347 | -- | -- | 0.147 | -- | 25.6 | 2972 | -- | -- |
| 45.09 | 0.313 | 10.3 | -- | 0.15 | -0.242 | -- | -- | 0.0827 | 22.6 | 25.51 | 875 | -- | -- |
| 41.15 | 0.3 | 10.3 | 0.476 | -- | -- | -- | -- | 0.0585 | -- | -- | -- | -- | -- |
| 46.96 | 0.321 | 10.3 | -- | 0.0531 | -- | -- | -- | 0.00542 | 23 | -- | -- | -- | -- |
| 46.13 | 0.316 | 10.3 | -- | -- | -0.172 | -- | -- | 0.0244 | -- | 26.5 | 3543 | -- | -- |
| 47.13 | 0.32 | 10.3 | -- | -- | -- | -- | -- | 0.00568 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.54 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 26 | 32.50 | humidity | 90.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 29 | 32.50 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 32 | 32.52 | wind | 1.0 | 30 | < th | dose independent | rect. | 14 | 4 |
| 37 | 32.52 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 44 | 32.57 | wind | 1.0 | 30 | < th | dose dependent | rect. | 14 | 4 |
| 73 | 32.87 | wind | 1.0 | 30 | < th | dose independent | rect. | 11 | 7 |
| 79 | 32.90 | wind | 1.0 | 30 | < th | dose independent | rect. | 11 | 5 |
| 107 | 33.07 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 10 |
| 109 | 33.16 | temperature | 25.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 120 | 33.33 | temperature | 25.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 138 | 33.47 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 14 | 3 |
| 139 | 33.47 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 152 | 33.58 | wind | 1.0 | 30 | < th | dose independent | rect. | 11 | 12 |
| 159 | 33.68 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 5 |
| 166 | 33.73 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 14 | 1 |
| 169 | 33.73 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 172 | 33.74 | wind | 1.0 | 30 | < th | dose dependent | rect. | 12 | 6 |
| 178 | 33.75 | wind | 1.0 | 30 | < th | dose dependent | rect. | 12 | 4 |
| 181 | 33.76 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 20 |
| 188 | 33.77 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 243 | 33.97 | temperature | 25.0 | 720 | < th | dose independent | rect. | 12 | 12 |
| 263 | 34.06 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 21 |
| 301 | 34.18 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 17 | 3 |
| 306 | 34.20 | temperature | 25.0 | 720 | > th | dose independent | rect. | 14 | 10 |
| 349 | 34.32 | temperature | 25.0 | 720 | > th | dose independent | sin | 17 | NA |
| 391 | 34.46 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 5 |
| 428 | 34.53 | temperature | 20.0 | 10 | > th | dose independent | rect. | 11 | 19 |
| 486 | 34.63 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 503 | 34.66 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 539 | 34.74 | temperature | 25.0 | 720 | < th | dose independent | sin | 18 | NA |
| 577 | 34.81 | temperature | 25.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 578 | 34.81 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 15 | 7 |
| 592 | 34.82 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 12 | 12 |
| 639 | 34.89 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 5 |
| 657 | 34.92 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 3 |
| 717 | 34.99 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 744 | 35.02 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 774 | 35.06 | temperature | 25.0 | 270 | < th | dose dependent | sin | 14 | NA |
| 813 | 35.11 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 13 |
| 822 | 35.13 | wind | 5.0 | 90 | < th | dose independent | rect. | 19 | 10 |
| 839 | 35.14 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 844 | 35.15 | wind | 9.0 | 90 | < th | dose dependent | rect. | 18 | 11 |
| 863 | 35.18 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 874 | 35.20 | radiation | 30.0 | 30 | < th | dose independent | rect. | 16 | 19 |
| 903 | 35.24 | temperature | 25.0 | 270 | < th | dose independent | sin | 13 | NA |
| 988 | 35.35 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 4 |
| 991 | 35.35 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 4 |
| 992 | 35.35 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 4 |
| 994 | 35.35 | radiation | 30.0 | 90 | < th | dose independent | rect. | 5 | 13 |
| 996 | 35.35 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 20 |