Os04g0613900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : K+ potassium transporter family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0613900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : K+ potassium transporter family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.63 | 0.459 | 10 | 1.19 | 0.886 | -1.51 | 0.124 | 0.144 | 0.667 | 19.8 | 17.25 | 10 | -- | -- |
| 95.49 | 0.459 | 10 | 1.16 | 0.876 | -1.51 | 0.108 | -- | 0.659 | 19.8 | 17.25 | 10 | -- | -- |
| 95.51 | 0.459 | 10 | 1.17 | 0.876 | -1.52 | -- | 0.104 | 0.664 | 19.8 | 17.25 | 10 | -- | -- |
| 95.52 | 0.458 | 10 | 1.16 | 0.876 | -1.51 | -- | -- | 0.659 | 19.8 | 17.25 | 10 | -- | -- |
| 136.93 | 0.548 | 10 | 1.19 | -- | -1.48 | -- | 0.326 | 0.655 | -- | 17.25 | 10 | -- | -- |
| 123.25 | 0.52 | 10.1 | 0.843 | 0.949 | -- | 0.138 | -- | 0.419 | 21.9 | -- | -- | -- | -- |
| 123.33 | 0.52 | 10.1 | 0.838 | 0.949 | -- | -- | -- | 0.419 | 21.9 | -- | -- | -- | -- |
| 137.04 | 0.548 | 10 | 1.14 | -- | -1.47 | -- | -- | 0.641 | -- | 17.25 | 10 | -- | -- |
| 127.35 | 0.528 | 10.1 | -- | 0.869 | -0.977 | -- | -- | 0.466 | 20.5 | 18.61 | 12 | -- | -- |
| 177.17 | 0.622 | 10.1 | 0.848 | -- | -- | -- | -- | 0.419 | -- | -- | -- | -- | -- |
| 141.84 | 0.557 | 10.1 | -- | 0.952 | -- | -- | -- | 0.326 | 21.9 | -- | -- | -- | -- |
| 169.23 | 0.608 | 10 | -- | -- | -1.11 | -- | -- | 0.475 | -- | 18.6 | 2 | -- | -- |
| 196.16 | 0.654 | 10.1 | -- | -- | -- | -- | -- | 0.325 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 90.61 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 21 |
| 10 | 92.64 | temperature | 10 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 11 | 92.65 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 21 |
| 19 | 93.32 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 19 |
| 31 | 93.92 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 20 |
| 35 | 94.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 23 |
| 49 | 94.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 20 |
| 58 | 94.95 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 22 |
| 67 | 95.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 20 |
| 73 | 95.29 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 79 | 95.41 | temperature | 20 | 10 | > th | dose dependent | rect. | 10 | 21 |
| 94 | 95.78 | temperature | 20 | 270 | > th | dose independent | rect. | 9 | 21 |
| 97 | 95.80 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 100 | 95.83 | temperature | 20 | 10 | > th | dose independent | rect. | 12 | 19 |
| 114 | 96.01 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 132 | 96.25 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 139 | 96.30 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 147 | 96.38 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 20 |
| 148 | 96.38 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 178 | 96.78 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 23 |
| 203 | 96.95 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 213 | 97.05 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 10 |
| 222 | 97.16 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 226 | 97.18 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 10 |
| 311 | 97.62 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 23 |
| 378 | 97.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 379 | 97.91 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 15 |
| 393 | 97.95 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 16 |
| 396 | 97.95 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 410 | 98.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 13 |
| 418 | 98.03 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 15 |
| 431 | 98.08 | temperature | 30 | 720 | < th | dose dependent | sin | 14 | NA |
| 463 | 98.16 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 525 | 98.28 | temperature | 15 | 1440 | > th | dose dependent | sin | 8 | NA |
| 582 | 98.38 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 9 |
| 584 | 98.38 | temperature | 30 | 1440 | < th | dose dependent | sin | 8 | NA |
| 621 | 98.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 628 | 98.45 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 645 | 98.49 | radiation | 30 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 656 | 98.50 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 695 | 98.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 21 |
| 723 | 98.62 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 728 | 98.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 4 |
| 771 | 98.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 6 |
| 790 | 98.74 | temperature | 10 | 720 | > th | dose dependent | sin | 13 | NA |
| 803 | 98.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 902 | 98.90 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 7 |
| 946 | 98.95 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 985 | 98.99 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 23 |