Os04g0613700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UTP--glucose-1-phosphate uridylyltransferase family protein.
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Os04g0613700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UTP--glucose-1-phosphate uridylyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 276.15 | 0.781 | 8.35 | -1.49 | 0.463 | -0.16 | 1.61 | -6.14 | -0.12 | 4.65 | 1005 | 1487 | -- | -- |
| 286.35 | 0.794 | 8.33 | -1.32 | 0.418 | -1.02 | 1.5 | -- | -0.23 | 4.81 | 1006 | 638 | -- | -- |
| 282.68 | 0.783 | 8.36 | -1.5 | 0.476 | -0.163 | -- | -6.08 | -0.13 | 4.07 | 1005 | 1572 | -- | -- |
| 291.96 | 0.801 | 8.34 | -1.32 | 0.427 | -1.04 | -- | -- | -0.241 | 4.24 | 1006 | 638 | -- | -- |
| 294.91 | 0.8 | 8.36 | -1.47 | -- | -0.178 | -- | -6.01 | -0.117 | -- | 1005 | 1598 | -- | -- |
| 305.18 | 0.819 | 8.3 | -1.39 | 0.467 | -- | 1.6 | -- | -0.0925 | 4.8 | -- | -- | -- | -- |
| 311.52 | 0.827 | 8.31 | -1.4 | 0.479 | -- | -- | -- | -0.101 | 4.22 | -- | -- | -- | -- |
| 301.63 | 0.809 | 8.34 | -1.3 | -- | -1.12 | -- | -- | -0.245 | -- | 1006 | 8 | -- | -- |
| 337.82 | 0.861 | 8.31 | -- | 0.395 | -1.18 | -- | -- | -0.113 | 4.31 | 1006 | 638 | -- | -- |
| 323.9 | 0.841 | 8.31 | -1.38 | -- | -- | -- | -- | -0.0882 | -- | -- | -- | -- | -- |
| 363.19 | 0.891 | 8.27 | -- | 0.452 | -- | -- | -- | 0.055 | 4.28 | -- | -- | -- | -- |
| 346.04 | 0.866 | 8.32 | -- | -- | -1.24 | -- | -- | -0.118 | -- | 1006 | 8 | -- | -- |
| 374.21 | 0.903 | 8.27 | -- | -- | -- | -- | -- | 0.065 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 269.82 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 19 |
| 5 | 271.53 | atmosphere | 1005 | 1440 | < th | dose dependent | rect. | 7 | 6 |
| 6 | 271.54 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 22 | 271.70 | atmosphere | 1005 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 33 | 271.85 | temperature | 30 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 36 | 271.98 | temperature | 30 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 60 | 272.12 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 63 | 272.13 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 98 | 273.11 | atmosphere | 1005 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 108 | 273.20 | atmosphere | 1005 | 1440 | < th | dose dependent | sin | 2 | NA |
| 114 | 273.36 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 124 | 273.50 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 4 | 16 |
| 132 | 273.61 | temperature | 25 | 270 | > th | dose dependent | sin | 7 | NA |
| 154 | 273.73 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 4 | 15 |
| 234 | 274.39 | temperature | 10 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 248 | 274.54 | wind | 5 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 265 | 274.71 | wind | 5 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 291 | 274.94 | wind | 3 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 327 | 275.20 | temperature | 30 | 90 | < th | dose independent | rect. | 3 | 16 |
| 381 | 275.59 | wind | 9 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 449 | 275.95 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 3 | 20 |
| 455 | 275.97 | wind | 9 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 496 | 276.18 | atmosphere | 1005 | 1440 | < th | dose dependent | no | NA | NA |
| 504 | 276.25 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 517 | 276.31 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 521 | 276.32 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 5 | 18 |
| 537 | 276.41 | wind | 7 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 590 | 276.57 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 7 |
| 594 | 276.58 | temperature | 25 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 645 | 276.72 | humidity | 90 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 647 | 276.73 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 13 | 20 |
| 648 | 276.73 | temperature | 25 | 90 | > th | dose dependent | rect. | 9 | 6 |
| 696 | 276.85 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 743 | 277.04 | wind | 3 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 750 | 277.07 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 766 | 277.12 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 774 | 277.16 | wind | 5 | 14400 | < th | dose dependent | rect. | 12 | 3 |
| 777 | 277.17 | wind | 1 | 14400 | > th | dose dependent | rect. | 12 | 4 |
| 779 | 277.18 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 781 | 277.18 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 19 |
| 792 | 277.25 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 808 | 277.31 | wind | 9 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 849 | 277.39 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 877 | 277.50 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 895 | 277.56 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 7 | 11 |
| 922 | 277.65 | wind | 9 | 14400 | < th | dose dependent | rect. | 12 | 4 |
| 942 | 277.69 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 23 | 20 |
| 973 | 277.77 | radiation | 10 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 996 | 277.82 | atmosphere | 1005 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 999 | 277.83 | wind | 9 | 14400 | > th | dose dependent | rect. | 20 | 20 |