Os04g0610700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Potassium transporter 13 (AtPOT13) (AtKT5).
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Os04g0610700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Potassium transporter 13 (AtPOT13) (AtKT5).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.37 | 0.217 | 11.7 | -0.0126 | 0.969 | -0.534 | -0.0967 | -0.671 | 0.249 | 23.6 | 21.66 | 9 | -- | -- |
| 21.77 | 0.219 | 11.7 | -0.0632 | 0.958 | -0.401 | -0.229 | -- | 0.242 | 23.6 | 21.66 | 9 | -- | -- |
| 21.39 | 0.217 | 11.7 | -0.00437 | 0.971 | -0.554 | -- | -0.749 | 0.25 | 23.6 | 21.6 | 2 | -- | -- |
| 21.98 | 0.22 | 11.7 | -0.0537 | 0.966 | -0.346 | -- | -- | 0.236 | 23.6 | 23.1 | 3 | -- | -- |
| 75.69 | 0.407 | 11.7 | 0.0678 | -- | 0.254 | -- | 0.17 | 0.31 | -- | 21.6 | 2 | -- | -- |
| 23.3 | 0.226 | 11.7 | 0.00856 | 0.916 | -- | -0.205 | -- | 0.281 | 23.5 | -- | -- | -- | -- |
| 23.48 | 0.227 | 11.7 | 0.017 | 0.917 | -- | -- | -- | 0.282 | 23.5 | -- | -- | -- | -- |
| 68.76 | 0.386 | 11.6 | 0.173 | -- | 0.601 | -- | -- | 0.403 | -- | 30.1 | 3 | -- | -- |
| 22.05 | 0.22 | 11.7 | -- | 0.963 | -0.325 | -- | -- | 0.244 | 23.6 | 23.1 | 3 | -- | -- |
| 76.22 | 0.408 | 11.7 | 0.0416 | -- | -- | -- | -- | 0.292 | -- | -- | -- | -- | -- |
| 23.49 | 0.227 | 11.7 | -- | 0.917 | -- | -- | -- | 0.28 | 23.5 | -- | -- | -- | -- |
| 69.53 | 0.388 | 11.7 | -- | -- | 0.559 | -- | -- | 0.376 | -- | 30.1 | 3 | -- | -- |
| 76.26 | 0.408 | 11.7 | -- | -- | -- | -- | -- | 0.287 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.19 | temperature | 20.0 | 90 | > th | dose independent | rect. | 18 | 11 |
| 2 | 20.33 | temperature | 20.0 | 90 | > th | dose independent | rect. | 14 | 15 |
| 8 | 20.55 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 2 |
| 10 | 20.55 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 12 | 20.61 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 18 | 2 |
| 14 | 20.65 | temperature | 20.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 15 | 20.65 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 22 | 20.68 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 3 | 1 |
| 29 | 20.73 | wind | 9.0 | 4320 | < th | dose independent | rect. | 21 | 6 |
| 31 | 20.75 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 36 | 20.77 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 8 |
| 42 | 20.81 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 45 | 20.82 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 48 | 20.83 | humidity | 80.0 | 10 | > th | dose independent | rect. | 18 | 2 |
| 52 | 20.85 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 69 | 20.91 | temperature | 20.0 | 30 | < th | dose independent | rect. | 19 | 10 |
| 75 | 20.91 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 20 | 7 |
| 78 | 20.93 | temperature | 20.0 | 30 | > th | dose independent | sin | 11 | NA |
| 82 | 20.93 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 21 | 10 |
| 86 | 20.95 | temperature | 20.0 | 30 | < th | dose independent | sin | 11 | NA |
| 90 | 20.95 | temperature | 20.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 94 | 20.96 | temperature | 20.0 | 10 | < th | dose independent | rect. | 22 | 7 |
| 149 | 21.02 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 2 |
| 175 | 21.04 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 19 | 11 |
| 228 | 21.07 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 15 | 5 |
| 266 | 21.10 | temperature | 20.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 285 | 21.11 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 363 | 21.14 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 375 | 21.15 | wind | 7.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 386 | 21.15 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 459 | 21.17 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 18 | 11 |
| 467 | 21.18 | temperature | 30.0 | 90 | < th | dose independent | rect. | 18 | 1 |
| 570 | 21.22 | temperature | 15.0 | 30 | > th | dose independent | rect. | 21 | 22 |
| 594 | 21.23 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 602 | 21.23 | temperature | 20.0 | 30 | > th | dose independent | rect. | 18 | 14 |
| 625 | 21.24 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 636 | 21.24 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 665 | 21.25 | wind | 3.0 | 90 | < th | dose dependent | rect. | 12 | 17 |
| 704 | 21.27 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 747 | 21.28 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 757 | 21.28 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 758 | 21.28 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 759 | 21.28 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 788 | 21.29 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 20 | 23 |
| 791 | 21.29 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 804 | 21.29 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 20 | 23 |
| 840 | 21.31 | wind | 5.0 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 841 | 21.31 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 911 | 21.33 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 912 | 21.33 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 913 | 21.33 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 923 | 21.33 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 937 | 21.34 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 945 | 21.34 | temperature | 20.0 | 30 | > th | dose independent | rect. | 18 | 17 |
| 948 | 21.34 | temperature | 20.0 | 90 | > th | dose independent | rect. | 12 | 23 |
| 972 | 21.34 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 21 | 8 |
| 989 | 21.35 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 19 | 3 |