Os04g0608400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EF-Hand type domain containing protein.
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Os04g0608400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EF-Hand type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.99 | 0.441 | 9.87 | 2.08 | 1.75 | 0.906 | -0.232 | -1.79 | 0.431 | 17.3 | 80.02 | 1396 | -- | -- |
| 90.69 | 0.444 | 9.88 | 1.94 | 1.75 | 0.795 | -0.302 | -- | 0.395 | 17.3 | 80.36 | 1377 | -- | -- |
| 88.1 | 0.437 | 9.87 | 2.08 | 1.74 | 0.902 | -- | -1.8 | 0.431 | 17.3 | 80 | 1387 | -- | -- |
| 90.89 | 0.444 | 9.88 | 1.93 | 1.73 | 0.795 | -- | -- | 0.398 | 17.3 | 80.52 | 1366 | -- | -- |
| 218.09 | 0.692 | 9.87 | 1.84 | -- | -0.631 | -- | -0.199 | 0.31 | -- | 80 | 1292 | -- | -- |
| 98.94 | 0.466 | 9.89 | 1.92 | 1.78 | -- | -0.191 | -- | 0.35 | 17.3 | -- | -- | -- | -- |
| 99.03 | 0.466 | 9.89 | 1.92 | 1.78 | -- | -- | -- | 0.349 | 17.3 | -- | -- | -- | -- |
| 216.81 | 0.689 | 9.86 | 1.8 | -- | -0.65 | -- | -- | 0.329 | -- | 79 | 1263 | -- | -- |
| 181.45 | 0.627 | 9.91 | -- | 1.67 | 1.1 | -- | -- | 0.294 | 17.2 | 87 | 1507 | -- | -- |
| 263.87 | 0.759 | 9.87 | 1.86 | -- | -- | -- | -- | 0.305 | -- | -- | -- | -- | -- |
| 195.83 | 0.655 | 9.94 | -- | 1.74 | -- | -- | -- | 0.136 | 17.3 | -- | -- | -- | -- |
| 301.94 | 0.812 | 9.91 | -- | -- | -0.688 | -- | -- | 0.131 | -- | 79 | 1263 | -- | -- |
| 354.65 | 0.879 | 9.92 | -- | -- | -- | -- | -- | 0.0993 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.59 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 8 | 77.70 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 10 | 77.83 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 12 | 78.17 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 15 | 78.47 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 17 | 78.53 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 7 |
| 20 | 78.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 21 | 78.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 28 | 78.82 | wind | 7.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 31 | 78.89 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 34 | 79.02 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 41 | 79.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 42 | 79.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 45 | 79.27 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 46 | 79.28 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 48 | 79.31 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 49 | 79.36 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 74 | 79.59 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 77 | 79.63 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 80 | 79.67 | temperature | 15.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 84 | 79.69 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 87 | 79.72 | wind | 7.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 89 | 79.74 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 90 | 79.74 | temperature | 15.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 94 | 79.78 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 96 | 79.80 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 106 | 79.90 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 108 | 79.90 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 109 | 79.90 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 112 | 79.90 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 113 | 79.90 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 114 | 79.90 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 117 | 79.90 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 118 | 79.90 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 135 | 80.05 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 137 | 80.06 | wind | 7.0 | 10 | < th | dose independent | rect. | 9 | 19 |
| 145 | 80.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 7 |
| 146 | 80.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 150 | 80.10 | humidity | 60.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 155 | 80.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 160 | 80.11 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 161 | 80.11 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 164 | 80.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 172 | 80.15 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 173 | 80.16 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 178 | 80.20 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 212 | 80.31 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 19 |
| 213 | 80.31 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 215 | 80.33 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 4 | 5 |
| 248 | 80.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 251 | 80.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 279 | 80.69 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 302 | 80.83 | wind | 9.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 308 | 80.86 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 5 |
| 309 | 80.86 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 7 |
| 312 | 80.86 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 313 | 80.86 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 350 | 80.90 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 7 |
| 352 | 80.91 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 363 | 80.95 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 364 | 80.95 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 367 | 80.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 17 |
| 370 | 80.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 383 | 81.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 386 | 81.00 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 388 | 81.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 389 | 81.00 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 394 | 81.01 | wind | 5.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 417 | 81.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 15 |
| 419 | 81.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 420 | 81.07 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 434 | 81.10 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 437 | 81.11 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 448 | 81.13 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 468 | 81.24 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 488 | 81.29 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 519 | 81.36 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 538 | 81.43 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 539 | 81.43 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 544 | 81.46 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 15 |
| 554 | 81.47 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 567 | 81.50 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 9 |
| 590 | 81.60 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 602 | 81.62 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 623 | 81.67 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 625 | 81.68 | radiation | 10.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 634 | 81.70 | radiation | 1.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 642 | 81.73 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 648 | 81.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 649 | 81.74 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 656 | 81.76 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 657 | 81.76 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 661 | 81.76 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 662 | 81.76 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 681 | 81.87 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 717 | 81.94 | wind | 7.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 741 | 81.99 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 751 | 82.03 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 9 |
| 763 | 82.05 | temperature | 15.0 | 10 | > th | dose independent | rect. | 16 | 17 |
| 774 | 82.08 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 8 |
| 781 | 82.10 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 793 | 82.12 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 825 | 82.17 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 9 |
| 834 | 82.19 | temperature | 15.0 | 270 | > th | dose independent | rect. | 12 | 9 |
| 886 | 82.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 9 |
| 889 | 82.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 898 | 82.31 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 915 | 82.35 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 938 | 82.39 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 991 | 82.53 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 995 | 82.54 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 8 |