Os04g0607100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF266, plant family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0607100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF266, plant family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.55 | 0.272 | 8.12 | -0.691 | 0.338 | 0.516 | -1.46 | 1.05 | 0.0793 | 7.99 | 66.86 | 884 | -- | -- |
| 34.66 | 0.274 | 8.12 | -0.609 | 0.357 | 0.57 | -1.09 | -- | 0.0816 | 7.57 | 60.75 | 924 | -- | -- |
| 37.12 | 0.284 | 8.12 | -0.73 | 0.557 | 0.383 | -- | 0.795 | 0.0666 | 8.36 | 60.06 | 1453 | -- | -- |
| 37.89 | 0.287 | 8.12 | -0.632 | 0.509 | 0.487 | -- | -- | 0.0838 | 7.7 | 59.73 | 1171 | -- | -- |
| 40.82 | 0.298 | 8.13 | -0.673 | -- | 0.828 | -- | 0.179 | 0.123 | -- | 68.92 | 739 | -- | -- |
| 39.46 | 0.295 | 8.12 | -0.614 | 0.551 | -- | -0.94 | -- | 0.0528 | 8.36 | -- | -- | -- | -- |
| 42.22 | 0.304 | 8.12 | -0.642 | 0.552 | -- | -- | -- | 0.0535 | 8.46 | -- | -- | -- | -- |
| 40.52 | 0.296 | 8.13 | -0.637 | -- | 0.814 | -- | -- | 0.117 | -- | 68 | 724 | -- | -- |
| 47.86 | 0.322 | 8.11 | -- | 0.49 | 0.555 | -- | -- | 0.14 | 7.68 | 36.41 | 1148 | -- | -- |
| 59.23 | 0.36 | 8.14 | -0.64 | -- | -- | -- | -- | 0.0589 | -- | -- | -- | -- | -- |
| 53.09 | 0.341 | 8.11 | -- | 0.549 | -- | -- | -- | 0.125 | 8.55 | -- | -- | -- | -- |
| 51.1 | 0.333 | 8.11 | -- | -- | 0.811 | -- | -- | 0.189 | -- | 66 | 735 | -- | -- |
| 70.03 | 0.391 | 8.12 | -- | -- | -- | -- | -- | 0.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.99 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 23 |
| 2 | 32.99 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 3 | 33.18 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 4 | 33.21 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 38 | 33.37 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 39 | 33.37 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 40 | 33.37 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 12 |
| 45 | 33.38 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 55 | 33.40 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 90 | 33.46 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 98 | 33.48 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 101 | 33.48 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 12 |
| 122 | 33.50 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 148 | 33.52 | humidity | 80.0 | 14400 | > th | dose independent | sin | 20 | NA |
| 161 | 33.52 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 20 | NA |
| 309 | 33.62 | humidity | 70.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 348 | 33.64 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 356 | 33.64 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 6 |
| 370 | 33.64 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 4 | 19 |
| 371 | 33.65 | humidity | 80.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 431 | 33.68 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 5 |
| 441 | 33.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 487 | 33.70 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 591 | 33.75 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 729 | 33.80 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 750 | 33.81 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 11 |
| 757 | 33.81 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 9 | 8 |
| 790 | 33.82 | humidity | 80.0 | 720 | > th | dose independent | rect. | 5 | 17 |
| 908 | 33.86 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 11 |
| 920 | 33.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 8 |
| 925 | 33.86 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 11 |
| 980 | 33.88 | humidity | 70.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 984 | 33.88 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 19 | NA |