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Os04g0606800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0167) R2 : 0.00921
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0723 (0.0351) R2dN8 : 0.0119 R2N8 : 0.00921
σ : 0.314
deviance : 45.22
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.06 0.2 11.6 0.619 0.54 -0.488 0.326 0.0771 0.198 23 24.16 1252 -- --
18.05 0.198 11.6 0.608 0.546 -0.484 0.346 -- 0.201 23 23.85 1234 -- --
18.48 0.2 11.6 0.64 0.536 -0.493 -- 0.2 0.214 23 23.75 1255 -- --
18.5 0.2 11.6 0.59 0.528 -0.475 -- -- 0.203 23 23.6 1285 -- --
30.79 0.26 11.6 0.513 -- -0.594 -- -0.2 0.193 -- 23.2 1520 -- --
25.88 0.239 11.6 0.442 0.477 -- 0.252 -- 0.12 22.6 -- -- -- --
26.14 0.239 11.6 0.432 0.476 -- -- -- 0.119 22.6 -- -- -- --
30.1 0.257 11.6 0.553 -- -0.632 -- -- 0.212 -- 22.63 1535 -- --
26.9 0.242 11.6 -- 0.539 -0.36 -- -- 0.117 22.9 23.52 1172 -- --
40.1 0.296 11.6 0.441 -- -- -- -- 0.121 -- -- -- -- --
31.07 0.261 11.6 -- 0.479 -- -- -- 0.0708 22.6 -- -- -- --
37.92 0.288 11.6 -- -- -0.532 -- -- 0.138 -- 22.63 1535 -- --
45.22 0.314 11.6 -- -- -- -- -- 0.0723 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.89 wind 7 43200 > th dose dependent rect. 14 7
4 17.96 temperature 20 1440 > th dose dependent rect. 17 1
5 17.96 temperature 10 1440 > th dose dependent rect. 17 2
13 18.10 wind 7 43200 < th dose independent rect. 13 1
14 18.10 wind 7 43200 > th dose independent rect. 12 10
22 18.16 temperature 25 720 > th dose dependent rect. 18 15
24 18.18 wind 7 43200 > th dose independent rect. 13 1
29 18.19 wind 7 43200 < th dose independent rect. 12 10
43 18.27 wind 7 43200 < th dose independent rect. 17 1
44 18.27 temperature 25 1440 > th dose dependent rect. 15 21
45 18.28 temperature 25 720 > th dose dependent sin 11 NA
50 18.28 temperature 30 30 < th dose dependent rect. 5 23
52 18.29 wind 5 43200 > th dose dependent rect. 13 1
57 18.30 wind 9 43200 < th dose independent rect. 14 7
61 18.30 temperature 30 1440 < th dose dependent rect. 18 1
69 18.30 temperature 25 1440 > th dose dependent rect. 22 21
71 18.30 temperature 30 10 < th dose dependent rect. 1 23
76 18.31 temperature 25 1440 > th dose dependent rect. 7 12
77 18.31 temperature 25 1440 > th dose dependent rect. 7 18
79 18.31 temperature 25 1440 > th dose dependent rect. 24 19
98 18.32 temperature 25 1440 > th dose dependent rect. 7 16
152 18.34 wind 7 43200 > th dose independent rect. 17 1
156 18.34 temperature 25 1440 > th dose dependent no NA NA
197 18.35 temperature 25 1440 > th dose dependent sin 0 NA
256 18.38 wind 7 43200 > th dose dependent rect. 13 17
278 18.40 wind 9 43200 > th dose independent rect. 17 4
284 18.40 temperature 25 1440 > th dose dependent rect. 22 16
309 18.42 wind 7 43200 > th dose independent rect. 12 6
313 18.42 temperature 25 1440 > th dose dependent rect. 7 7
322 18.42 temperature 30 90 < th dose dependent rect. 11 23
372 18.45 temperature 30 10 < th dose dependent rect. 13 23
391 18.48 wind 9 43200 < th dose independent rect. 17 4
413 18.50 wind 7 43200 > th dose independent sin 19 NA
415 18.50 wind 7 43200 > th dose dependent rect. 17 4
416 18.50 temperature 25 1440 > th dose dependent rect. 7 4
431 18.51 wind 7 43200 > th dose independent rect. 11 19
481 18.54 temperature 25 1440 > th dose dependent rect. 3 8
495 18.55 wind 7 43200 < th dose independent rect. 11 7
499 18.55 wind 7 43200 < th dose independent rect. 11 17
500 18.55 wind 7 43200 < th dose independent rect. 11 19
510 18.56 wind 7 43200 < th dose independent sin 19 NA
517 18.56 temperature 25 1440 > th dose dependent rect. 13 12
534 18.57 temperature 25 1440 > th dose dependent rect. 13 10
579 18.59 temperature 30 10 < th dose dependent no NA NA
590 18.59 temperature 25 1440 > th dose dependent rect. 15 10
593 18.59 wind 9 43200 > th dose dependent rect. 18 12
626 18.60 temperature 30 10 < th dose dependent rect. 15 23
666 18.62 temperature 10 1440 > th dose dependent rect. 9 12
672 18.62 temperature 30 10 < th dose dependent rect. 21 23
675 18.63 wind 7 43200 > th dose dependent sin 16 NA
703 18.64 wind 5 43200 > th dose dependent rect. 12 3
736 18.65 temperature 30 10 < th dose dependent rect. 11 23
760 18.66 temperature 30 10 < th dose dependent rect. 17 23
767 18.67 wind 7 43200 > th dose independent rect. 3 18
791 18.68 wind 7 43200 < th dose independent rect. 3 18
905 18.72 temperature 30 10 < th dose dependent rect. 19 23