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Os04g0603900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.13 (0.0376) R2 : 0.536
β1 : -1.86 (0.137) R2dD : 0.195 R2D : -0.00651
β2 : 0.756 (0.0938) R2dC : 0.0666 R2C : -0.048
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.52 (0.08) R2dN8 : 0.493 R2N8 : 0.274
σ : 0.705
deviance : 226.63
__
_____
C
peak time of C : 8.69
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
209.39 0.68 7.21 -2.46 0.758 -0.82 0.647 2.35 -1.78 7.38 30.1 10 -- --
215.51 0.684 7.18 -2.1 0.759 -0.911 0.614 -- -1.72 7.11 27.4 11 -- --
210.53 0.676 7.21 -2.44 0.753 -0.809 -- 2.31 -1.78 7.41 30.1 10 -- --
216.2 0.685 7.17 -2.07 0.767 -0.854 -- -- -1.71 7.47 27 37 -- --
240.05 0.726 7.22 -2.36 -- -0.74 -- 1.92 -1.76 -- 27.32 8 -- --
226.59 0.706 7.13 -1.87 0.757 -- 0.123 -- -1.52 8.65 -- -- -- --
226.63 0.705 7.13 -1.86 0.756 -- -- -- -1.52 8.69 -- -- -- --
242.9 0.729 7.19 -2.08 -- -1 -- -- -1.67 -- 24 7 -- --
317.78 0.83 7.08 -- 0.75 0.181 -- -- -1.29 9.12 35.62 100 -- --
258.89 0.752 7.15 -1.86 -- -- -- -- -1.51 -- -- -- -- --
318.13 0.834 7.08 -- 0.751 -- -- -- -1.31 8.87 -- -- -- --
341.62 0.861 7.08 -- -- 0.716 -- -- -1.22 -- 47.4 615 -- --
350.3 0.874 7.1 -- -- -- -- -- -1.31 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 204.20 humidity 80 14400 > th dose dependent rect. 19 2
2 204.21 humidity 70 14400 < th dose dependent rect. 19 1
6 204.37 humidity 70 14400 < th dose dependent rect. 18 14
10 204.71 humidity 80 14400 < th dose independent rect. 16 4
11 204.72 humidity 70 14400 < th dose independent rect. 19 13
13 204.77 humidity 70 14400 < th dose dependent rect. 18 3
26 204.94 wind 9 43200 < th dose dependent rect. 18 14
29 204.97 wind 9 43200 < th dose dependent rect. 18 12
31 204.98 wind 1 43200 > th dose dependent rect. 18 14
33 205.02 humidity 80 14400 < th dose independent rect. 17 1
35 205.03 wind 1 43200 > th dose dependent rect. 18 12
44 205.10 humidity 80 14400 > th dose independent rect. 16 4
46 205.11 humidity 60 14400 < th dose independent rect. 18 2
53 205.17 humidity 80 14400 > th dose independent rect. 17 2
63 205.18 wind 1 43200 > th dose dependent rect. 5 1
82 205.28 wind 5 43200 < th dose independent rect. 17 15
92 205.29 wind 9 43200 < th dose dependent rect. 20 12
99 205.32 wind 9 43200 < th dose dependent rect. 20 10
104 205.37 humidity 60 14400 > th dose independent rect. 18 2
109 205.38 wind 1 43200 > th dose dependent rect. 20 12
112 205.39 wind 5 43200 > th dose independent rect. 17 15
113 205.39 wind 9 43200 < th dose dependent rect. 5 1
116 205.40 wind 1 43200 > th dose dependent rect. 20 10
119 205.41 wind 9 43200 < th dose dependent sin 11 NA
120 205.42 humidity 60 14400 > th dose independent rect. 18 5
132 205.46 wind 1 43200 > th dose dependent sin 11 NA
148 205.53 humidity 80 14400 > th dose independent rect. 14 7
152 205.55 humidity 80 14400 < th dose independent rect. 8 13
154 205.55 wind 5 43200 < th dose dependent rect. 23 9
165 205.60 wind 3 43200 < th dose dependent rect. 1 5
166 205.61 humidity 60 14400 > th dose independent rect. 18 9
182 205.67 humidity 70 14400 > th dose independent rect. 19 13
194 205.69 humidity 80 14400 > th dose independent rect. 8 13
205 205.72 wind 5 43200 < th dose dependent rect. 4 3
267 205.86 wind 9 43200 > th dose dependent rect. 16 13
310 205.95 humidity 80 14400 < th dose independent sin 20 NA
312 205.95 wind 5 43200 < th dose independent rect. 18 8
320 205.96 wind 3 43200 < th dose independent rect. 5 1
342 206.01 wind 5 43200 > th dose independent rect. 18 8
355 206.03 wind 3 43200 > th dose independent rect. 5 1
364 206.05 wind 5 43200 > th dose dependent rect. 18 6
417 206.15 humidity 80 14400 > th dose independent sin 20 NA
422 206.15 wind 9 43200 > th dose dependent rect. 16 8
445 206.18 humidity 60 14400 < th dose dependent rect. 17 16
447 206.19 wind 5 43200 > th dose dependent rect. 18 4
621 206.48 wind 3 43200 < th dose independent rect. 4 4
623 206.48 wind 9 43200 < th dose independent rect. 17 11
633 206.49 wind 3 43200 > th dose independent rect. 4 4
682 206.55 humidity 90 14400 < th dose independent rect. 20 1
687 206.56 humidity 80 14400 > th dose independent rect. 8 4
689 206.56 wind 7 43200 < th dose dependent rect. 7 1
695 206.57 humidity 70 1440 > th dose dependent rect. 6 7
699 206.58 wind 5 43200 < th dose independent sin 12 NA
702 206.58 wind 1 43200 > th dose dependent rect. 7 1
710 206.59 humidity 80 1440 > th dose dependent rect. 6 11
761 206.64 humidity 50 14400 < th dose dependent rect. 16 19
768 206.66 humidity 80 43200 > th dose independent rect. 5 2
790 206.70 wind 5 43200 > th dose independent sin 12 NA
792 206.70 humidity 70 14400 > th dose dependent sin 18 NA
833 206.76 temperature 15 720 > th dose independent rect. 19 16
839 206.76 humidity 90 1440 > th dose dependent rect. 6 13
849 206.77 wind 9 43200 < th dose independent rect. 17 7
867 206.79 humidity 90 1440 > th dose independent rect. 6 12
873 206.80 wind 7 43200 < th dose independent rect. 18 3
925 206.86 wind 9 43200 > th dose independent rect. 16 13
937 206.87 humidity 80 14400 < th dose independent rect. 8 6
997 206.93 wind 3 43200 > th dose independent rect. 24 8