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Os04g0603800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Chromo domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0169) R2 : 0.466
β1 : 1.21 (0.0619) R2dD : 0.463 R2D : 0.371
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.28 (0.0361) R2dN8 : 0.0945 R2N8 : 0.00313
σ : 0.317
deviance : 46.11
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
32.77 0.269 10.9 0.997 0.428 0.467 -0.00214 0.101 0.165 8.21 11.32 6862 -- --
32.78 0.267 10.9 0.982 0.426 0.454 -0.00606 -- 0.163 8.17 11.1 6871 -- --
32.77 0.267 10.9 0.997 0.427 0.467 -- 0.101 0.165 8.21 10.19 6881 -- --
32.77 0.267 10.9 0.973 0.426 0.462 -- -- 0.157 8.19 10.33 6869 -- --
42.5 0.304 10.9 0.994 -- 0.465 -- 0.102 0.164 -- 4.312 7208 -- --
36.32 0.283 10.9 1.2 0.423 -- -0.00638 -- 0.275 7.99 -- -- -- --
36.32 0.282 10.9 1.2 0.423 -- -- -- 0.275 7.99 -- -- -- --
42.51 0.304 10.9 0.974 -- 0.458 -- -- 0.158 -- 4.411 7200 -- --
37.15 0.284 11 -- 0.429 0.984 -- -- -0.153 8.15 -2.622 47520 -- --
46.11 0.317 10.9 1.21 -- -- -- -- 0.28 -- -- -- -- --
74.51 0.404 10.9 -- 0.432 -- -- -- 0.141 7.79 -- -- -- --
47.3 0.32 11 -- -- 0.982 -- -- -0.148 -- -5.605 47520 -- --
84.61 0.429 10.9 -- -- -- -- -- 0.146 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.28 humidity 70 14400 < th dose dependent rect. 18 14
2 31.31 humidity 70 14400 < th dose dependent rect. 18 2
15 31.49 humidity 70 14400 < th dose independent rect. 18 4
25 31.50 humidity 70 14400 < th dose independent rect. 18 14
37 31.57 humidity 70 1440 > th dose dependent rect. 7 4
39 31.58 humidity 60 14400 > th dose independent rect. 17 3
72 31.74 temperature 25 720 > th dose dependent rect. 18 4
78 31.77 wind 1 43200 > th dose dependent rect. 24 4
79 31.77 wind 1 43200 > th dose dependent rect. 23 6
80 31.78 temperature 25 720 > th dose dependent rect. 18 1
85 31.82 wind 9 43200 < th dose dependent rect. 24 4
87 31.83 wind 5 43200 < th dose dependent rect. 2 1
90 31.84 wind 1 43200 > th dose dependent rect. 2 1
94 31.84 wind 9 43200 < th dose dependent rect. 23 6
95 31.86 humidity 70 14400 > th dose independent rect. 19 13
115 31.96 wind 3 43200 > th dose independent rect. 2 2
129 31.99 radiation 20 14400 > th dose dependent rect. 16 15
130 32.00 wind 3 43200 < th dose independent rect. 2 2
133 32.00 humidity 90 1440 < th dose dependent rect. 7 3
135 32.00 humidity 60 14400 < th dose dependent rect. 16 17
136 32.01 wind 3 43200 > th dose independent rect. 23 6
160 32.03 wind 3 43200 > th dose independent rect. 1 4
192 32.06 radiation 1 720 > th dose independent rect. 18 11
204 32.08 wind 3 43200 < th dose independent rect. 23 6
229 32.11 radiation 20 14400 > th dose dependent rect. 16 1
283 32.15 radiation 1 720 > th dose independent rect. 18 1
299 32.16 temperature 30 720 < th dose independent rect. 17 1
302 32.16 wind 3 1440 > th dose independent rect. 6 12
303 32.16 wind 3 1440 < th dose independent rect. 6 12
323 32.19 radiation 20 14400 < th dose independent rect. 16 15
354 32.21 humidity 80 720 < th dose dependent rect. 18 3
435 32.29 humidity 70 720 > th dose independent rect. 16 19
461 32.31 radiation 10 1440 > th dose dependent rect. 17 13
462 32.32 radiation 30 14400 > th dose independent rect. 7 1
467 32.32 radiation 10 1440 < th dose independent rect. 17 4
468 32.32 humidity 80 1440 > th dose independent rect. 6 5
498 32.33 radiation 10 1440 < th dose independent rect. 17 1
499 32.33 humidity 90 10 > th dose independent rect. 4 2
504 32.33 radiation 10 1440 > th dose dependent rect. 17 1
528 32.34 radiation 30 14400 < th dose independent rect. 15 17
546 32.36 radiation 20 14400 < th dose independent rect. 16 5
552 32.36 radiation 10 1440 < th dose independent rect. 17 11
555 32.36 radiation 40 14400 > th dose dependent rect. 8 1
566 32.37 radiation 20 14400 < th dose independent rect. 16 2
593 32.38 radiation 10 1440 < th dose independent rect. 17 8
642 32.41 radiation 30 14400 < th dose independent rect. 7 1
644 32.41 humidity 80 1440 < th dose independent rect. 6 5
662 32.42 radiation 10 1440 > th dose independent rect. 17 13
696 32.44 wind 3 43200 > th dose dependent sin 8 NA
736 32.45 wind 9 43200 < th dose dependent rect. 23 12
770 32.47 temperature 30 720 < th dose independent rect. 17 10
773 32.47 humidity 90 30 > th dose dependent rect. 4 2
840 32.50 temperature 30 720 < th dose independent rect. 17 8
855 32.50 radiation 20 4320 > th dose dependent rect. 6 2
928 32.53 wind 3 1440 > th dose independent sin 0 NA
929 32.53 wind 3 1440 < th dose independent sin 0 NA
950 32.53 radiation 40 14400 < th dose dependent rect. 18 3
982 32.54 wind 1 43200 < th dose independent rect. 11 19
990 32.54 wind 9 43200 > th dose dependent rect. 15 8
997 32.54 wind 3 1440 < th dose dependent rect. 6 13