Os04g0602600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0602600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein prenyltransferase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.29 | 0.526 | 9.56 | 1.87 | 1.68 | -0.0821 | -1.83 | 4.44 | -0.25 | 19.6 | 19.5 | 1371 | -- | -- |
| 142.8 | 0.557 | 9.65 | 2.13 | 1.79 | -1.15 | -2.11 | -- | -0.305 | 19.3 | 13.9 | 27583 | -- | -- |
| 134.19 | 0.54 | 9.56 | 1.94 | 1.68 | -0.0964 | -- | 4.58 | -0.249 | 19.7 | 19.5 | 1455 | -- | -- |
| 148.75 | 0.568 | 9.67 | 2.17 | 1.67 | -1.31 | -- | -- | -0.269 | 19.6 | 13 | 27602 | -- | -- |
| 284.56 | 0.786 | 9.51 | 1.93 | -- | -0.183 | -- | 4.86 | -0.26 | -- | 19.16 | 1506 | -- | -- |
| 167.9 | 0.607 | 9.7 | 0.968 | 1.7 | -- | -2.01 | -- | -0.52 | 19.5 | -- | -- | -- | -- |
| 178.96 | 0.626 | 9.71 | 1.01 | 1.7 | -- | -- | -- | -0.524 | 19.6 | -- | -- | -- | -- |
| 302.39 | 0.81 | 9.58 | 2.12 | -- | -1.39 | -- | -- | -0.195 | -- | 13.2 | 27528 | -- | -- |
| 203.92 | 0.665 | 9.72 | -- | 1.7 | -0.455 | -- | -- | -0.464 | 19.5 | 9.4 | 37229 | -- | -- |
| 333.68 | 0.854 | 9.67 | 0.99 | -- | -- | -- | -- | -0.549 | -- | -- | -- | -- | -- |
| 206.04 | 0.671 | 9.73 | -- | 1.69 | -- | -- | -- | -0.637 | 19.7 | -- | -- | -- | -- |
| 355.37 | 0.878 | 9.65 | -- | -- | -0.393 | -- | -- | -0.51 | -- | 9.6 | 37396 | -- | -- |
| 359.54 | 0.885 | 9.69 | -- | -- | -- | -- | -- | -0.659 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.55 | humidity | 80 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 3 | 120.91 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 4 | 121.12 | humidity | 50 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 5 | 121.38 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 6 | 121.61 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 10 | 121.78 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 11 | 121.92 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 16 | 122.22 | humidity | 50 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 19 | 122.26 | humidity | 90 | 14400 | > th | dose independent | rect. | 24 | 10 |
| 24 | 122.43 | radiation | 40 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 26 | 122.49 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 12 |
| 27 | 122.50 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 5 |
| 50 | 122.95 | humidity | 90 | 14400 | > th | dose independent | sin | 8 | NA |
| 55 | 123.01 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 79 | 123.46 | humidity | 50 | 43200 | > th | dose dependent | rect. | 18 | 8 |
| 83 | 123.56 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 85 | 123.57 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 104 | 123.81 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 110 | 123.84 | temperature | 15 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 122 | 124.03 | temperature | 15 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 132 | 124.17 | humidity | 90 | 14400 | > th | dose dependent | sin | 4 | NA |
| 149 | 124.37 | temperature | 15 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 150 | 124.37 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 14 |
| 151 | 124.38 | temperature | 15 | 14400 | < th | dose independent | rect. | 3 | 9 |
| 154 | 124.41 | temperature | 15 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 159 | 124.44 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 12 |
| 184 | 124.55 | temperature | 20 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 185 | 124.55 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 17 |
| 196 | 124.59 | temperature | 15 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 208 | 124.65 | temperature | 15 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 220 | 124.70 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 231 | 124.73 | temperature | 15 | 14400 | > th | dose independent | sin | 3 | NA |
| 232 | 124.73 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 247 | 124.77 | temperature | 15 | 14400 | > th | dose independent | rect. | 22 | 15 |
| 267 | 124.82 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 303 | 124.90 | humidity | 90 | 14400 | < th | dose independent | sin | 8 | NA |
| 304 | 124.90 | temperature | 15 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 323 | 124.93 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 324 | 124.93 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 330 | 124.94 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 348 | 124.98 | temperature | 15 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 352 | 124.99 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 6 |
| 359 | 125.01 | temperature | 15 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 361 | 125.01 | temperature | 15 | 14400 | > th | dose independent | rect. | 21 | 9 |
| 368 | 125.02 | temperature | 15 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 381 | 125.05 | temperature | 15 | 14400 | < th | dose independent | sin | 6 | NA |
| 383 | 125.05 | temperature | 15 | 14400 | < th | dose independent | rect. | 23 | 12 |
| 387 | 125.06 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 412 | 125.09 | temperature | 15 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 441 | 125.13 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 507 | 125.19 | temperature | 15 | 14400 | > th | dose independent | rect. | 9 | 21 |
| 509 | 125.19 | temperature | 20 | 14400 | < th | dose dependent | sin | 17 | NA |
| 512 | 125.19 | temperature | 20 | 14400 | < th | dose dependent | rect. | 9 | 17 |
| 519 | 125.20 | temperature | 15 | 14400 | > th | dose independent | rect. | 3 | 22 |
| 561 | 125.24 | temperature | 15 | 14400 | > th | dose independent | rect. | 23 | 23 |
| 572 | 125.25 | wind | 1 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 574 | 125.25 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 614 | 125.29 | temperature | 20 | 14400 | < th | dose dependent | rect. | 4 | 18 |
| 619 | 125.30 | temperature | 15 | 14400 | > th | dose independent | no | NA | NA |
| 643 | 125.33 | temperature | 20 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 646 | 125.34 | temperature | 15 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 688 | 125.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 718 | 125.42 | temperature | 20 | 14400 | < th | dose dependent | sin | 22 | NA |
| 771 | 125.47 | temperature | 20 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 799 | 125.50 | temperature | 20 | 1440 | > th | dose independent | rect. | 16 | 12 |
| 820 | 125.52 | temperature | 20 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 845 | 125.55 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 15 |
| 916 | 125.64 | temperature | 20 | 1440 | < th | dose independent | rect. | 11 | 20 |