Os04g0600900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os04g0600900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 163.62 | 0.601 | 7.23 | -1.81 | 1.93 | -3.14 | 5.17 | -4.11 | -0.0856 | 4.8 | 49.01 | 961 | 8.59 | -- |
| 172.43 | 0.612 | 7.25 | -1.97 | 1.94 | -3.01 | 3.18 | -- | -0.117 | 4 | 48 | 965 | 9.5 | -- |
| 194.81 | 0.65 | 7.25 | -1.98 | 2.81 | -3.65 | -- | 2.82 | -0.0819 | 4.44 | 17.54 | 978 | 9.3 | -- |
| 200.87 | 0.66 | 7.25 | -2.02 | 1.79 | -3.03 | -- | -- | -0.124 | 4.53 | 48.01 | 1010 | 9.14 | -- |
| 254.14 | 0.742 | 7.24 | -2.13 | -- | -1.93 | -- | 1.88 | -0.0266 | -- | 52.27 | 1260 | 7.59 | -- |
| 245.86 | 0.735 | 7.27 | -1.96 | 0.943 | -- | 2.43 | -- | -0.0893 | 1.49 | -- | -- | -- | -- |
| 267.85 | 0.766 | 7.28 | -2.04 | 0.948 | -- | -- | -- | -0.0997 | 0.749 | -- | -- | -- | -- |
| 220.46 | 0.692 | 7.27 | -1.9 | -- | -2.47 | -- | -- | -0.153 | -- | -26.91 | 1384 | 6 | -- |
| 304.39 | 0.813 | 7.19 | -- | 1.96 | -3.55 | -- | -- | 0.0727 | 5.92 | 52.17 | 975 | 7.69 | -- |
| 324.06 | 0.841 | 7.27 | -2.01 | -- | -- | -- | -- | -0.0826 | -- | -- | -- | -- | -- |
| 377.57 | 0.909 | 7.23 | -- | 0.917 | -- | -- | -- | 0.128 | 0.646 | -- | -- | -- | -- |
| 312.82 | 0.824 | 7.24 | -- | -- | -2.52 | -- | -- | 0.0338 | -- | -84.47 | 1405 | 6.21 | -- |
| 430.21 | 0.968 | 7.22 | -- | -- | -- | -- | -- | 0.14 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 165.20 | humidity | 50 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 11 | 172.03 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 13 | 172.29 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 28 | 174.14 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 8 |
| 36 | 175.33 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 39 | 175.63 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 16 |
| 83 | 178.87 | humidity | 60 | 720 | > th | dose dependent | sin | 13 | NA |
| 92 | 179.67 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 138 | 180.35 | humidity | 80 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 163 | 181.55 | humidity | 80 | 720 | < th | dose independent | rect. | 19 | 3 |
| 167 | 181.61 | humidity | 80 | 720 | < th | dose independent | rect. | 20 | 1 |
| 193 | 182.41 | humidity | 90 | 720 | < th | dose independent | rect. | 17 | 7 |
| 242 | 183.89 | temperature | 30 | 720 | < th | dose independent | rect. | 18 | 8 |
| 258 | 184.44 | humidity | 90 | 720 | < th | dose dependent | sin | 13 | NA |
| 276 | 185.06 | humidity | 80 | 720 | > th | dose independent | rect. | 19 | 3 |
| 290 | 185.23 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 381 | 186.92 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 3 |
| 405 | 187.30 | humidity | 90 | 720 | > th | dose independent | rect. | 22 | 1 |
| 484 | 188.37 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 494 | 188.64 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 501 | 188.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 14 |
| 519 | 189.01 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 15 |
| 524 | 189.11 | humidity | 70 | 1440 | < th | dose independent | sin | 14 | NA |
| 532 | 189.19 | humidity | 90 | 720 | > th | dose independent | rect. | 21 | 3 |
| 750 | 191.20 | humidity | 70 | 1440 | < th | dose independent | rect. | 14 | 6 |
| 869 | 191.81 | wind | 3 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 888 | 191.92 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 970 | 192.35 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 978 | 192.40 | humidity | 90 | 720 | < th | dose independent | rect. | 4 | 20 |