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Os04g0600200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Alternative oxidase 1a (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.44 (0.0208) R2 : 0.324
β1 : 0.694 (0.0763) R2dD : 0.127 R2D : 0.0856
β2 : 0.594 (0.0512) R2dC : 0.2 R2C : 0.179
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.206 (0.0445) R2dN8 : 0.0425 R2N8 : 0.0044
σ : 0.392
deviance : 69.99
__
_____
C
peak time of C : 14.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
61.86 0.37 9.4 0.995 0.553 0.455 0.437 -0.714 0.326 14.8 19.57 855 -- --
63.13 0.37 9.42 0.936 0.542 0.604 0.326 -- 0.318 14.7 19.5 1132 -- --
62.34 0.368 9.4 0.983 0.569 0.468 -- -0.61 0.324 15 19.55 730 -- --
62.15 0.367 9.41 1.02 0.554 0.707 -- -- 0.336 14.7 18.58 2295 -- --
79.61 0.416 9.4 0.999 -- 0.643 -- -0.414 0.334 -- 19.5 928 -- --
69.74 0.392 9.44 0.687 0.593 -- 0.266 -- 0.204 14.5 -- -- -- --
69.99 0.392 9.44 0.694 0.594 -- -- -- 0.206 14.6 -- -- -- --
79.28 0.415 9.41 1.07 -- 0.881 -- -- 0.346 -- 18.36 2385 -- --
81.95 0.422 9.45 -- 0.554 0.557 -- -- 0.2 14.4 17.5 2050 -- --
90.66 0.445 9.44 0.669 -- -- -- -- 0.191 -- -- -- -- --
82.7 0.425 9.46 -- 0.58 -- -- -- 0.128 14.6 -- -- -- --
99.89 0.465 9.45 -- -- 0.445 -- -- 0.171 -- 17.4 2293 -- --
102.47 0.472 9.46 -- -- -- -- -- 0.117 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 57.72 temperature 20 14400 < th dose independent rect. 21 1
2 57.75 temperature 20 14400 > th dose independent rect. 21 1
4 57.90 wind 9 43200 > th dose independent rect. 9 5
6 58.00 wind 9 43200 > th dose dependent rect. 10 6
9 58.05 wind 9 43200 > th dose independent rect. 4 12
11 58.07 wind 9 43200 > th dose independent rect. 7 9
20 58.16 wind 9 43200 < th dose independent rect. 9 5
25 58.20 wind 9 43200 < th dose independent rect. 5 11
28 58.22 wind 9 43200 > th dose independent rect. 20 20
37 58.27 wind 9 43200 < th dose independent rect. 8 7
46 58.30 wind 9 43200 > th dose independent rect. 18 22
68 58.42 wind 9 43200 > th dose independent sin 1 NA
85 58.47 wind 9 43200 < th dose independent rect. 20 20
86 58.47 wind 9 43200 > th dose dependent rect. 10 11
87 58.47 wind 9 43200 > th dose dependent rect. 12 20
103 58.53 wind 9 43200 < th dose independent rect. 18 22
111 58.55 wind 9 43200 > th dose dependent rect. 10 20
115 58.56 wind 9 43200 > th dose independent rect. 4 17
117 58.57 wind 9 43200 < th dose independent sin 1 NA
212 58.75 wind 9 43200 > th dose independent rect. 10 23
213 58.75 wind 9 43200 > th dose independent rect. 13 23
222 58.76 wind 9 43200 > th dose dependent sin 19 NA
224 58.77 wind 9 43200 > th dose independent no NA NA
237 58.78 wind 9 14400 < th dose independent rect. 18 19
240 58.78 wind 9 43200 > th dose independent rect. 7 23
246 58.79 wind 9 43200 < th dose independent rect. 4 17
262 58.80 wind 9 43200 > th dose independent rect. 15 23
323 58.89 wind 9 14400 > th dose dependent rect. 18 19
333 58.90 wind 7 43200 > th dose dependent rect. 4 12
345 58.92 wind 9 43200 < th dose independent rect. 13 22
375 58.96 wind 9 43200 < th dose dependent rect. 6 1
397 58.99 wind 9 43200 < th dose independent no NA NA
402 58.99 wind 9 43200 < th dose independent rect. 10 23
442 59.05 wind 9 43200 < th dose independent rect. 15 23
465 59.09 wind 7 43200 > th dose dependent sin 1 NA
507 59.16 wind 1 4320 < th dose dependent rect. 5 2
520 59.18 wind 9 14400 > th dose dependent rect. 20 17
530 59.21 wind 1 43200 > th dose dependent rect. 6 1
549 59.25 wind 3 43200 > th dose independent rect. 6 1
580 59.32 wind 7 43200 > th dose dependent rect. 20 21
581 59.33 wind 3 43200 < th dose independent rect. 6 1
616 59.40 wind 3 43200 > th dose independent rect. 1 14
629 59.42 wind 3 43200 < th dose dependent rect. 5 7
632 59.43 wind 3 43200 < th dose independent rect. 11 1
644 59.45 wind 3 43200 > th dose independent rect. 23 16
654 59.47 wind 3 43200 > th dose independent rect. 4 11
655 59.47 wind 3 43200 < th dose independent rect. 1 14
667 59.48 wind 3 43200 > th dose independent rect. 5 9
685 59.51 wind 3 43200 > th dose independent rect. 11 1
686 59.51 wind 3 43200 < th dose independent rect. 5 9
687 59.51 wind 3 43200 > th dose independent rect. 21 18
701 59.52 wind 7 43200 > th dose dependent no NA NA
708 59.54 wind 3 43200 < th dose independent rect. 4 11
716 59.55 wind 3 43200 < th dose independent rect. 23 16
722 59.55 wind 7 43200 > th dose dependent rect. 6 23
733 59.56 wind 7 43200 > th dose dependent rect. 15 23
768 59.61 wind 3 43200 < th dose independent rect. 21 18
795 59.65 wind 1 14400 > th dose dependent rect. 20 10
800 59.66 wind 1 4320 < th dose independent rect. 5 3
820 59.69 wind 1 43200 > th dose independent rect. 2 1
821 59.69 wind 9 14400 < th dose dependent rect. 20 10
823 59.70 wind 3 43200 > th dose independent sin 4 NA
841 59.72 wind 1 43200 < th dose dependent rect. 8 5
842 59.72 wind 5 43200 < th dose dependent rect. 22 17
855 59.74 wind 3 43200 < th dose independent sin 4 NA
862 59.74 wind 1 14400 > th dose dependent rect. 20 12
869 59.75 wind 9 14400 < th dose dependent rect. 20 12
876 59.76 wind 5 43200 < th dose dependent rect. 4 11
887 59.77 wind 1 14400 > th dose dependent rect. 20 16
888 59.77 wind 9 14400 < th dose dependent rect. 20 16
890 59.77 wind 9 43200 < th dose dependent rect. 22 17
892 59.78 wind 1 43200 > th dose independent rect. 8 5
900 59.79 wind 1 43200 > th dose dependent rect. 4 11
916 59.81 temperature 20 720 > th dose independent rect. 23 13
918 59.81 wind 9 14400 < th dose dependent sin 7 NA
922 59.82 humidity 80 43200 < th dose independent rect. 21 4
931 59.83 wind 1 14400 > th dose dependent sin 7 NA
936 59.83 wind 9 43200 < th dose dependent rect. 4 11
940 59.83 wind 1 43200 > th dose dependent rect. 22 17
955 59.85 temperature 20 720 > th dose independent rect. 1 11
963 59.85 wind 9 14400 < th dose dependent rect. 3 9
978 59.86 wind 5 43200 < th dose dependent rect. 1 14
993 59.87 wind 9 43200 < th dose dependent rect. 18 14