Os04g0592300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0592300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.13 | 0.439 | 5.56 | 1.45 | 0.777 | 0.959 | -0.0974 | -2.45 | 0.329 | 7.03 | 29.5 | 6 | -- | -- |
| 94.71 | 0.453 | 5.61 | 1.06 | 0.754 | 1 | -0.0828 | -- | 0.247 | 6.84 | 27.2 | 56 | -- | -- |
| 87.15 | 0.435 | 5.56 | 1.45 | 0.778 | 0.958 | -- | -2.45 | 0.328 | 7.03 | 29.5 | 5 | -- | -- |
| 94.73 | 0.453 | 5.61 | 1.06 | 0.754 | 1.01 | -- | -- | 0.249 | 6.89 | 27.18 | 56 | -- | -- |
| 109.81 | 0.488 | 5.56 | 1.68 | -- | 1.57 | -- | -3.59 | 0.397 | -- | 42.54 | 254 | -- | -- |
| 108.76 | 0.489 | 5.66 | 0.807 | 0.906 | -- | -0.456 | -- | 0.0235 | 5.66 | -- | -- | -- | -- |
| 109.24 | 0.489 | 5.66 | 0.805 | 0.904 | -- | -- | -- | 0.0257 | 5.76 | -- | -- | -- | -- |
| 118.57 | 0.507 | 5.62 | 1.14 | -- | 1.37 | -- | -- | 0.286 | -- | 30.81 | 264 | -- | -- |
| 120.99 | 0.512 | 5.65 | -- | 0.843 | 0.577 | -- | -- | 0.0474 | 6.21 | 26.08 | 56 | -- | -- |
| 151.65 | 0.575 | 5.67 | 0.834 | -- | -- | -- | -- | 0.047 | -- | -- | -- | -- | -- |
| 126.34 | 0.526 | 5.68 | -- | 0.917 | -- | -- | -- | -0.064 | 5.72 | -- | -- | -- | -- |
| 150.67 | 0.572 | 5.66 | -- | -- | 1.1 | -- | -- | 0.0773 | -- | 42.07 | 255 | -- | -- |
| 169.98 | 0.609 | 5.69 | -- | -- | -- | -- | -- | -0.0455 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.20 | temperature | 10 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 27 | 79.55 | temperature | 20 | 90 | > th | dose independent | rect. | 6 | 21 |
| 52 | 81.79 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 20 |
| 67 | 82.83 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 15 |
| 95 | 83.95 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 21 |
| 111 | 84.51 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 116 | 84.71 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 14 |
| 146 | 85.54 | temperature | 15 | 90 | > th | dose dependent | sin | 7 | NA |
| 195 | 86.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 197 | 86.18 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 17 |
| 201 | 86.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 207 | 86.29 | temperature | 15 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 209 | 86.34 | temperature | 30 | 30 | < th | dose dependent | sin | 6 | NA |
| 243 | 86.71 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 15 |
| 263 | 86.97 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 271 | 87.12 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 278 | 87.31 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 279 | 87.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 311 | 87.58 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 312 | 87.60 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 352 | 87.98 | temperature | 15 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 354 | 87.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 409 | 88.44 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 422 | 88.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 436 | 88.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 439 | 88.79 | radiation | 20 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 473 | 89.00 | temperature | 15 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 478 | 89.03 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 21 |
| 483 | 89.08 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 527 | 89.37 | temperature | 15 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 528 | 89.39 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 20 |
| 572 | 89.65 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 578 | 89.68 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 20 |
| 584 | 89.73 | humidity | 50 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 586 | 89.73 | temperature | 15 | 10 | > th | dose dependent | rect. | 19 | 21 |
| 634 | 89.96 | temperature | 20 | 90 | < th | dose independent | sin | 8 | NA |
| 640 | 89.97 | humidity | 50 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 656 | 90.01 | humidity | 60 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 677 | 90.14 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 699 | 90.21 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 7 |
| 720 | 90.30 | radiation | 1 | 270 | < th | dose dependent | sin | 7 | NA |
| 748 | 90.39 | temperature | 20 | 90 | < th | dose independent | rect. | 11 | 20 |
| 768 | 90.43 | humidity | 50 | 43200 | > th | dose independent | rect. | 22 | 11 |
| 772 | 90.43 | temperature | 15 | 10 | > th | dose dependent | rect. | 19 | 17 |
| 786 | 90.48 | humidity | 80 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 794 | 90.50 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 14 |
| 797 | 90.51 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 8 |
| 803 | 90.52 | temperature | 20 | 90 | > th | dose independent | sin | 7 | NA |
| 816 | 90.54 | humidity | 80 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 853 | 90.63 | humidity | 50 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 862 | 90.65 | atmosphere | 1000 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 863 | 90.65 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 879 | 90.69 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 5 |
| 887 | 90.72 | temperature | 20 | 270 | < th | dose independent | sin | 10 | NA |
| 927 | 90.77 | humidity | 50 | 43200 | > th | dose independent | rect. | 17 | 17 |
| 929 | 90.77 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 3 |
| 952 | 90.81 | radiation | 10 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 979 | 90.85 | humidity | 50 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 982 | 90.86 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 994 | 90.88 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 20 |