Os04g0590800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os04g0590800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 183.08 | 0.636 | 2.99 | -0.857 | 0.326 | -3.2 | -0.38 | -17.7 | -0.0867 | 7.93 | 9.075 | 757 | -- | -- |
| 190.79 | 0.648 | 3.08 | -0.634 | 0.33 | 0.957 | -0.258 | -- | -0.112 | 7.66 | 8.426 | 356 | -- | -- |
| 183.5 | 0.631 | 2.99 | -0.867 | 0.325 | -3.18 | -- | -17.4 | -0.0882 | 7.92 | 9.059 | 757 | -- | -- |
| 189.51 | 0.641 | 3.08 | -0.623 | 0.334 | 1.18 | -- | -- | -0.0896 | 7.54 | 8.3 | 167 | -- | -- |
| 189.18 | 0.641 | 3 | -0.883 | -- | -3.2 | -- | -17 | -0.0851 | -- | 9.083 | 757 | -- | -- |
| 194.12 | 0.653 | 3.09 | -0.708 | 0.307 | -- | -0.162 | -- | -0.135 | 8.02 | -- | -- | -- | -- |
| 194.19 | 0.653 | 3.09 | -0.712 | 0.307 | -- | -- | -- | -0.134 | 8.04 | -- | -- | -- | -- |
| 190.94 | 0.644 | 3.09 | -0.587 | -- | 1.28 | -- | -- | -0.0926 | -- | 10.17 | 112 | -- | -- |
| 197.64 | 0.655 | 3.06 | -- | 0.34 | 1.62 | -- | -- | -0.00901 | 7.25 | 8.2 | 109 | -- | -- |
| 199.35 | 0.66 | 3.09 | -0.71 | -- | -- | -- | -- | -0.131 | -- | -- | -- | -- | -- |
| 207.57 | 0.674 | 3.07 | -- | 0.303 | -- | -- | -- | -0.0551 | 8.21 | -- | -- | -- | -- |
| 199.62 | 0.658 | 3.07 | -- | -- | 1.55 | -- | -- | -0.0221 | -- | 10.1 | 125 | -- | -- |
| 212.64 | 0.681 | 3.08 | -- | -- | -- | -- | -- | -0.0519 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 179.68 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 3 | 181.52 | wind | 9.0 | 720 | > th | dose independent | rect. | 16 | 21 |
| 6 | 182.22 | wind | 9.0 | 720 | > th | dose dependent | rect. | 18 | 16 |
| 8 | 182.57 | wind | 7.0 | 720 | > th | dose dependent | rect. | 16 | 20 |
| 11 | 182.94 | humidity | 90.0 | 10 | > th | dose independent | rect. | 2 | 10 |
| 16 | 183.15 | humidity | 80.0 | 720 | > th | dose independent | rect. | 1 | 11 |
| 19 | 183.21 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 9 | 4 |
| 22 | 183.30 | wind | 9.0 | 270 | > th | dose dependent | rect. | 11 | 4 |
| 29 | 183.44 | wind | 9.0 | 270 | > th | dose independent | rect. | 11 | 4 |
| 38 | 183.64 | wind | 9.0 | 270 | > th | dose dependent | rect. | 9 | 6 |
| 49 | 183.67 | wind | 7.0 | 10 | < th | dose independent | rect. | 4 | 22 |
| 50 | 183.68 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 53 | 183.71 | wind | 9.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 57 | 183.75 | radiation | 10.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 61 | 183.87 | wind | 9.0 | 270 | > th | dose dependent | rect. | 18 | 21 |
| 64 | 183.92 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 65 | 183.93 | wind | 9.0 | 720 | > th | dose independent | rect. | 16 | 1 |
| 74 | 183.95 | wind | 9.0 | 270 | > th | dose independent | rect. | 9 | 6 |
| 99 | 184.01 | wind | 9.0 | 270 | > th | dose dependent | sin | 4 | NA |
| 104 | 184.03 | wind | 9.0 | 720 | > th | dose independent | rect. | 18 | 16 |
| 112 | 184.08 | wind | 9.0 | 720 | > th | dose independent | sin | 10 | NA |
| 114 | 184.11 | wind | 9.0 | 720 | < th | dose independent | sin | 10 | NA |
| 140 | 184.28 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 141 | 184.29 | radiation | 10.0 | 720 | > th | dose independent | rect. | 6 | 4 |
| 161 | 184.32 | wind | 9.0 | 720 | > th | dose independent | rect. | 9 | 10 |
| 172 | 184.34 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 232 | 184.44 | wind | 9.0 | 270 | > th | dose independent | sin | 5 | NA |
| 235 | 184.45 | humidity | 90.0 | 10 | < th | dose independent | rect. | 24 | 12 |
| 252 | 184.50 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 23 | 16 |
| 260 | 184.51 | wind | 9.0 | 270 | < th | dose independent | sin | 6 | NA |
| 261 | 184.51 | radiation | 10.0 | 720 | > th | dose independent | rect. | 9 | 1 |
| 267 | 184.53 | wind | 9.0 | 720 | > th | dose independent | no | NA | NA |
| 330 | 184.59 | wind | 9.0 | 720 | > th | dose independent | sin | 0 | NA |
| 331 | 184.59 | humidity | 90.0 | 10 | < th | dose independent | sin | 3 | NA |
| 333 | 184.60 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 1 | 9 |
| 334 | 184.60 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 22 |
| 394 | 184.89 | wind | 7.0 | 10 | < th | dose independent | rect. | 7 | 14 |
| 411 | 185.02 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 440 | 185.08 | radiation | 10.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 458 | 185.13 | radiation | 1.0 | 270 | < th | dose independent | rect. | 9 | 4 |
| 467 | 185.16 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 497 | 185.25 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 15 | 12 |
| 525 | 185.27 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 544 | 185.30 | humidity | 90.0 | 10 | < th | dose independent | rect. | 24 | 21 |
| 569 | 185.33 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 15 | 12 |
| 572 | 185.34 | atmosphere | 1015.0 | 1440 | > th | dose independent | sin | 13 | NA |
| 575 | 185.34 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 15 | 18 |
| 586 | 185.35 | radiation | 10.0 | 10 | < th | dose independent | rect. | 21 | 17 |
| 589 | 185.35 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 20 |
| 593 | 185.36 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 615 | 185.38 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 618 | 185.39 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 20 | 7 |
| 676 | 185.42 | atmosphere | 1015.0 | 1440 | > th | dose dependent | sin | 12 | NA |
| 685 | 185.42 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 5 | 11 |
| 715 | 185.44 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 717 | 185.44 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 732 | 185.45 | radiation | 10.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 733 | 185.45 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 9 | 1 |
| 736 | 185.45 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 739 | 185.45 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 8 | 20 |
| 740 | 185.46 | atmosphere | 1015.0 | 1440 | < th | dose independent | sin | 13 | NA |
| 748 | 185.46 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 2 | 12 |
| 760 | 185.47 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 5 | 7 |
| 763 | 185.48 | radiation | 20.0 | 10 | > th | dose independent | sin | 8 | NA |
| 813 | 185.51 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 11 | 2 |
| 814 | 185.51 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 821 | 185.52 | temperature | 15.0 | 720 | > th | dose independent | rect. | 7 | 9 |
| 827 | 185.52 | atmosphere | 1015.0 | 1440 | > th | dose dependent | rect. | 19 | 2 |
| 835 | 185.53 | wind | 9.0 | 720 | < th | dose independent | no | NA | NA |
| 838 | 185.53 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 21 | 10 |
| 868 | 185.55 | humidity | 90.0 | 10 | > th | dose independent | sin | 2 | NA |
| 883 | 185.56 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 23 | 9 |
| 891 | 185.57 | wind | 7.0 | 10 | < th | dose independent | sin | 2 | NA |
| 922 | 185.59 | radiation | 10.0 | 30 | < th | dose independent | rect. | 2 | 14 |
| 953 | 185.63 | humidity | 80.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 957 | 185.63 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 23 | 7 |
| 961 | 185.63 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 2 | 14 |
| 999 | 185.66 | humidity | 90.0 | 270 | > th | dose independent | rect. | 11 | 2 |