Os04g0589600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, group 1 domain containing protein.
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Os04g0589600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, group 1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.26 | 0.263 | 10.1 | -0.925 | 0.43 | -0.589 | 0.411 | 1.33 | -0.0751 | 0.663 | -0.0002448 | 745 | -- | -- |
| 33.52 | 0.27 | 10.1 | -0.977 | 0.478 | -0.563 | 0.372 | -- | -0.0944 | 0.501 | -9.397 | 816 | -- | -- |
| 31.58 | 0.262 | 10.1 | -0.929 | 0.497 | -0.586 | -- | 1.33 | -0.0663 | 0.732 | -1.044 | 836 | -- | -- |
| 34.04 | 0.272 | 10.2 | -0.995 | 0.478 | -0.529 | -- | -- | -0.0992 | 0.867 | -4.49 | 821 | -- | -- |
| 36.35 | 0.281 | 10.1 | -0.881 | -- | -0.789 | -- | 0.462 | -0.0508 | -- | -0.04122 | 430 | -- | -- |
| 37.71 | 0.288 | 10.2 | -1.03 | 0.603 | -- | 0.109 | -- | -0.162 | 3.22 | -- | -- | -- | -- |
| 37.75 | 0.288 | 10.2 | -1.03 | 0.605 | -- | -- | -- | -0.162 | 3.26 | -- | -- | -- | -- |
| 35.93 | 0.279 | 10.1 | -0.989 | -- | -0.786 | -- | -- | -0.0933 | -- | -20.07 | 372 | -- | -- |
| 59.06 | 0.358 | 10.1 | -- | 0.594 | -0.604 | -- | -- | 0.0351 | 1.15 | -23.07 | 1010 | -- | -- |
| 58.44 | 0.357 | 10.2 | -1.01 | -- | -- | -- | -- | -0.147 | -- | -- | -- | -- | -- |
| 65.93 | 0.38 | 10.1 | -- | 0.584 | -- | -- | -- | -0.0473 | 3.26 | -- | -- | -- | -- |
| 61.69 | 0.366 | 10.1 | -- | -- | -0.802 | -- | -- | 0.0185 | -- | -4.929 | 382 | -- | -- |
| 85.27 | 0.431 | 10.1 | -- | -- | -- | -- | -- | -0.0347 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.44 | radiation | 40 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 30.84 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 5 | 30.91 | radiation | 10 | 1440 | > th | dose dependent | rect. | 7 | 6 |
| 6 | 30.91 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 21 |
| 25 | 31.00 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 26 | 31.04 | radiation | 1 | 720 | > th | dose dependent | rect. | 14 | 22 |
| 29 | 31.06 | radiation | 40 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 30 | 31.07 | radiation | 30 | 1440 | < th | dose independent | rect. | 16 | 21 |
| 31 | 31.07 | radiation | 40 | 1440 | < th | dose dependent | rect. | 8 | 5 |
| 32 | 31.08 | radiation | 30 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 36 | 31.11 | radiation | 30 | 1440 | < th | dose independent | rect. | 2 | 11 |
| 37 | 31.11 | radiation | 10 | 1440 | > th | dose dependent | sin | 7 | NA |
| 39 | 31.11 | radiation | 40 | 720 | < th | dose dependent | rect. | 1 | 14 |
| 41 | 31.12 | radiation | 30 | 1440 | < th | dose independent | rect. | 7 | 6 |
| 81 | 31.15 | radiation | 20 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 115 | 31.20 | radiation | 30 | 720 | < th | dose independent | rect. | 16 | 23 |
| 117 | 31.21 | radiation | 30 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 118 | 31.21 | radiation | 30 | 4320 | < th | dose independent | rect. | 20 | 12 |
| 132 | 31.23 | radiation | 30 | 4320 | < th | dose independent | rect. | 18 | 14 |
| 144 | 31.25 | radiation | 30 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 152 | 31.27 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 154 | 31.27 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 156 | 31.27 | radiation | 30 | 720 | < th | dose dependent | rect. | 1 | 16 |
| 159 | 31.28 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 211 | 31.31 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 21 |
| 213 | 31.31 | radiation | 40 | 720 | < th | dose dependent | rect. | 16 | 23 |
| 214 | 31.31 | radiation | 40 | 720 | < th | dose dependent | rect. | 23 | 23 |
| 215 | 31.32 | radiation | 30 | 1440 | < th | dose independent | sin | 7 | NA |
| 217 | 31.32 | radiation | 40 | 720 | < th | dose dependent | sin | 4 | NA |
| 221 | 31.33 | radiation | 1 | 720 | > th | dose dependent | rect. | 5 | 13 |
| 246 | 31.34 | radiation | 1 | 720 | > th | dose dependent | no | NA | NA |
| 307 | 31.35 | radiation | 40 | 720 | < th | dose dependent | no | NA | NA |
| 313 | 31.35 | radiation | 1 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 316 | 31.35 | radiation | 40 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 318 | 31.36 | radiation | 30 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 324 | 31.36 | radiation | 20 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 360 | 31.36 | radiation | 40 | 720 | < th | dose dependent | rect. | 14 | 23 |
| 384 | 31.37 | radiation | 20 | 720 | < th | dose independent | rect. | 1 | 23 |
| 394 | 31.37 | radiation | 1 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 396 | 31.37 | radiation | 40 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 488 | 31.39 | radiation | 40 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 547 | 31.45 | radiation | 40 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 603 | 31.51 | radiation | 20 | 720 | < th | dose independent | no | NA | NA |
| 640 | 31.53 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 645 | 31.53 | radiation | 20 | 720 | < th | dose independent | rect. | 19 | 23 |
| 662 | 31.54 | radiation | 20 | 720 | < th | dose independent | rect. | 8 | 23 |
| 683 | 31.55 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 685 | 31.55 | radiation | 20 | 720 | < th | dose independent | rect. | 23 | 23 |
| 844 | 31.57 | radiation | 20 | 720 | < th | dose independent | rect. | 6 | 23 |