Os04g0587200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pectinesterase inhibitor domain containing protein.
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Os04g0587200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pectinesterase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 256.16 | 0.752 | 4.65 | 1.61 | 2.89 | -1.65 | 1.82 | -2.55 | 0.08 | 19.3 | 1.66 | 243 | -- | -- |
| 268.78 | 0.764 | 4.65 | 1.63 | 2.83 | -1.38 | 2.11 | -- | 0.0865 | 19.6 | 5.505 | 245 | -- | -- |
| 264.31 | 0.757 | 4.64 | 1.61 | 2.84 | -1.67 | -- | -2.62 | 0.0856 | 19.2 | 1.62 | 226 | -- | -- |
| 280.38 | 0.78 | 4.65 | 1.56 | 2.86 | -1.54 | -- | -- | 0.088 | 19.4 | 1.464 | 243 | -- | -- |
| 583.36 | 1.13 | 4.6 | 1.59 | -- | -2.21 | -- | -2.58 | -0.0601 | -- | -0.6448 | 18 | -- | -- |
| 296.19 | 0.807 | 4.67 | 1.59 | 2.8 | -- | 2.17 | -- | -0.0207 | 20.7 | -- | -- | -- | -- |
| 311.69 | 0.827 | 4.67 | 1.52 | 2.8 | -- | -- | -- | -0.0201 | 20.7 | -- | -- | -- | -- |
| 598.08 | 1.14 | 4.6 | 1.52 | -- | -2.21 | -- | -- | -0.068 | -- | -1.244 | 15 | -- | -- |
| 345.3 | 0.865 | 4.67 | -- | 2.83 | -1.4 | -- | -- | -0.0614 | 19.5 | 1.894 | 235 | -- | -- |
| 754.83 | 1.28 | 4.6 | 1.51 | -- | -- | -- | -- | -0.0441 | -- | -- | -- | -- | -- |
| 372.46 | 0.903 | 4.71 | -- | 2.8 | -- | -- | -- | -0.189 | 20.7 | -- | -- | -- | -- |
| 657.85 | 1.19 | 4.63 | -- | -- | -2.18 | -- | -- | -0.164 | -- | -3.069 | 39 | -- | -- |
| 815.07 | 1.33 | 4.64 | -- | -- | -- | -- | -- | -0.212 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 244.55 | radiation | 10 | 270 | > th | dose independent | rect. | 9 | 7 |
| 2 | 247.20 | radiation | 30 | 90 | < th | dose dependent | sin | 19 | NA |
| 5 | 247.64 | radiation | 10 | 90 | < th | dose dependent | sin | 20 | NA |
| 7 | 247.85 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 8 |
| 12 | 248.91 | radiation | 30 | 270 | < th | dose dependent | rect. | 5 | 14 |
| 15 | 249.11 | radiation | 1 | 90 | > th | dose dependent | sin | 17 | NA |
| 19 | 249.55 | radiation | 10 | 270 | > th | dose independent | rect. | 11 | 4 |
| 23 | 249.93 | humidity | 90 | 270 | < th | dose dependent | rect. | 11 | 4 |
| 24 | 250.00 | radiation | 1 | 270 | > th | dose dependent | rect. | 9 | 7 |
| 34 | 250.78 | humidity | 80 | 270 | < th | dose independent | rect. | 11 | 4 |
| 51 | 251.64 | humidity | 80 | 90 | < th | dose independent | rect. | 11 | 6 |
| 55 | 251.78 | radiation | 20 | 270 | < th | dose independent | rect. | 5 | 14 |
| 56 | 251.80 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 6 |
| 59 | 252.14 | humidity | 80 | 90 | < th | dose independent | rect. | 21 | 21 |
| 63 | 252.27 | humidity | 90 | 270 | < th | dose independent | rect. | 9 | 7 |
| 66 | 252.39 | humidity | 80 | 10 | < th | dose independent | rect. | 12 | 6 |
| 67 | 252.40 | radiation | 10 | 270 | > th | dose independent | sin | 23 | NA |
| 68 | 252.42 | radiation | 10 | 270 | > th | dose independent | rect. | 9 | 22 |
| 82 | 252.95 | temperature | 15 | 270 | > th | dose dependent | rect. | 8 | 8 |
| 83 | 253.04 | radiation | 1 | 270 | > th | dose dependent | sin | 23 | NA |
| 96 | 253.44 | humidity | 90 | 10 | < th | dose dependent | rect. | 12 | 6 |
| 102 | 253.48 | radiation | 30 | 270 | < th | dose dependent | sin | 23 | NA |
| 103 | 253.49 | radiation | 1 | 270 | > th | dose dependent | rect. | 9 | 22 |
| 124 | 253.59 | humidity | 90 | 90 | < th | dose dependent | rect. | 20 | 21 |
| 155 | 253.76 | radiation | 10 | 90 | > th | dose independent | sin | 19 | NA |
| 162 | 253.85 | humidity | 90 | 10 | < th | dose dependent | rect. | 12 | 4 |
| 185 | 254.20 | radiation | 40 | 270 | < th | dose dependent | rect. | 13 | 22 |
| 186 | 254.28 | temperature | 15 | 90 | > th | dose dependent | rect. | 2 | 15 |
| 195 | 254.38 | humidity | 80 | 10 | < th | dose independent | rect. | 12 | 4 |
| 210 | 254.72 | radiation | 10 | 90 | > th | dose independent | rect. | 12 | 6 |
| 249 | 255.07 | radiation | 30 | 270 | < th | dose independent | rect. | 13 | 22 |
| 318 | 255.55 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 6 |
| 319 | 255.56 | humidity | 60 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 388 | 256.00 | radiation | 40 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 445 | 256.39 | radiation | 1 | 90 | > th | dose dependent | rect. | 12 | 7 |
| 489 | 256.58 | humidity | 90 | 10 | < th | dose dependent | rect. | 12 | 17 |
| 608 | 257.06 | radiation | 10 | 90 | < th | dose independent | sin | 19 | NA |
| 632 | 257.09 | radiation | 10 | 90 | < th | dose independent | sin | 17 | NA |
| 633 | 257.10 | radiation | 1 | 270 | > th | dose dependent | no | NA | NA |
| 729 | 257.31 | radiation | 40 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 738 | 257.39 | radiation | 20 | 270 | < th | dose independent | rect. | 2 | 23 |
| 743 | 257.42 | radiation | 20 | 270 | < th | dose independent | sin | 22 | NA |
| 753 | 257.51 | humidity | 60 | 10 | > th | dose dependent | rect. | 7 | 15 |
| 927 | 258.03 | radiation | 40 | 270 | < th | dose dependent | no | NA | NA |
| 969 | 258.31 | humidity | 60 | 90 | > th | dose dependent | sin | 22 | NA |
| 975 | 258.39 | humidity | 60 | 10 | > th | dose dependent | sin | 20 | NA |