Os04g0587100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pectinesterase inhibitor domain containing protein.
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Os04g0587100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pectinesterase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.39 | 0.411 | 3.1 | 0.0732 | 0.126 | -0.44 | -0.233 | 3.27 | 0.0981 | 6.25 | 0.1826 | 10 | -- | -- |
| 78.6 | 0.413 | 3.1 | 0.0538 | 0.105 | 0.247 | -0.2 | -- | 0.109 | 6.3 | 0.4001 | 8 | -- | -- |
| 76.47 | 0.407 | 3.1 | 0.0735 | 0.125 | -0.449 | -- | 3.32 | 0.0997 | 6.76 | 0.1095 | 9 | -- | -- |
| 78.7 | 0.413 | 3.1 | 0.0485 | 0.104 | 0.264 | -- | -- | 0.108 | 6.87 | 0.0124 | 8 | -- | -- |
| 77.26 | 0.409 | 3.1 | 0.0732 | -- | -0.368 | -- | 3.14 | 0.104 | -- | 0.07883 | 9 | -- | -- |
| 78.96 | 0.417 | 3.11 | 0.0652 | 0.114 | -- | -0.215 | -- | 0.102 | 6.5 | -- | -- | -- | -- |
| 79.07 | 0.416 | 3.11 | 0.062 | 0.114 | -- | -- | -- | 0.102 | 6.4 | -- | -- | -- | -- |
| 79.25 | 0.415 | 3.11 | 0.0509 | -- | 0.294 | -- | -- | 0.111 | -- | 0.4002 | 8 | -- | -- |
| 78.76 | 0.413 | 3.11 | -- | 0.104 | 0.276 | -- | -- | 0.103 | 6.87 | 0.09291 | 8 | -- | -- |
| 79.75 | 0.417 | 3.11 | 0.065 | -- | -- | -- | -- | 0.105 | -- | -- | -- | -- | -- |
| 79.18 | 0.416 | 3.11 | -- | 0.114 | -- | -- | -- | 0.0954 | 6.37 | -- | -- | -- | -- |
| 79.32 | 0.415 | 3.11 | -- | -- | 0.306 | -- | -- | 0.106 | -- | 0.4 | 8 | -- | -- |
| 79.86 | 0.417 | 3.11 | -- | -- | -- | -- | -- | 0.0976 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.34 | wind | 3.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 4 | 73.02 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 6 | 73.12 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 7 | 73.17 | temperature | 15.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 8 | 73.18 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 10 | 73.23 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 13 | 73.23 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 17 | 73.23 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 27 | 73.23 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 28 | 73.23 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 48 | 73.23 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 51 | 73.23 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 56 | 73.24 | wind | 3.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 57 | 73.24 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 59 | 73.28 | humidity | 80.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 61 | 73.29 | wind | 7.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 64 | 73.29 | temperature | 30.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 65 | 73.29 | humidity | 50.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 69 | 73.29 | radiation | 1.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 74 | 73.29 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 24 | 1 |
| 75 | 73.29 | temperature | 10.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 76 | 73.29 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 81 | 73.29 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 82 | 73.30 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 84 | 73.34 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 85 | 73.37 | humidity | 90.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 88 | 73.40 | temperature | 25.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 89 | 73.42 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 90 | 73.47 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 7 |
| 93 | 73.48 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 96 | 73.52 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 109 | 73.78 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 119 | 73.78 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 135 | 73.86 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 1 |
| 136 | 73.86 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 8 | 1 |
| 138 | 73.88 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 142 | 74.01 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 145 | 74.11 | wind | 1.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 146 | 74.12 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 149 | 74.16 | atmosphere | 1010.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 156 | 74.18 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 217 | 74.31 | wind | 9.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 265 | 74.45 | atmosphere | 1010.0 | 30 | > th | dose dependent | sin | 0 | NA |
| 551 | 74.66 | wind | 1.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 664 | 74.77 | wind | 9.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 665 | 74.77 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 749 | 75.09 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 847 | 75.38 | wind | 9.0 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 865 | 75.47 | wind | 7.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 874 | 75.48 | humidity | 50.0 | 10 | > th | dose independent | sin | 7 | NA |
| 902 | 75.60 | humidity | 90.0 | 720 | < th | dose independent | rect. | 24 | 1 |
| 925 | 75.67 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 18 | 13 |
| 930 | 75.71 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 952 | 75.80 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 15 | 18 |
| 961 | 75.84 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 11 | 1 |