Os04g0586600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os04g0586600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.2 | 0.171 | 2.8 | 0.00498 | 0.0433 | -0.125 | -0.0896 | 1.2 | 0.0319 | 4.23 | 0.1258 | 9 | -- | -- |
| 13.55 | 0.171 | 2.8 | -0.00277 | 0.0365 | 0.141 | -0.0542 | -- | 0.0351 | 4.33 | 0.09522 | 8 | -- | -- |
| 13.22 | 0.169 | 2.79 | 0.00655 | 0.043 | -0.126 | -- | 1.17 | 0.0325 | 4.53 | 0.07725 | 8 | -- | -- |
| 13.55 | 0.171 | 2.8 | -0.00205 | 0.0364 | 0.135 | -- | -- | 0.0353 | 4.16 | 0.1123 | 8 | -- | -- |
| 13.31 | 0.17 | 2.79 | 0.00772 | -- | -0.102 | -- | 1.24 | 0.0342 | -- | 0.08503 | 9 | -- | -- |
| 13.65 | 0.173 | 2.8 | 0.00457 | 0.045 | -- | -0.0274 | -- | 0.0324 | 4.04 | -- | -- | -- | -- |
| 13.65 | 0.173 | 2.8 | 0.00489 | 0.0447 | -- | -- | -- | 0.0325 | 3.94 | -- | -- | -- | -- |
| 13.62 | 0.172 | 2.8 | -0.000712 | -- | 0.156 | -- | -- | 0.037 | -- | 0.4217 | 8 | -- | -- |
| 13.55 | 0.171 | 2.8 | -- | 0.0364 | 0.135 | -- | -- | 0.0355 | 4.16 | 0.1144 | 8 | -- | -- |
| 13.76 | 0.173 | 2.8 | 0.00672 | -- | -- | -- | -- | 0.0337 | -- | -- | -- | -- | -- |
| 13.65 | 0.173 | 2.8 | -- | 0.0448 | -- | -- | -- | 0.032 | 3.94 | -- | -- | -- | -- |
| 13.62 | 0.172 | 2.8 | -- | -- | 0.156 | -- | -- | 0.0371 | -- | 0.4224 | 8 | -- | -- |
| 13.76 | 0.173 | 2.8 | -- | -- | -- | -- | -- | 0.033 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 12.92 | temperature | 25.0 | 10 | > th | dose independent | rect. | 24 | 5 |
| 2 | 12.93 | wind | 3.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 5 | 13.02 | temperature | 25.0 | 10 | > th | dose independent | rect. | 22 | 7 |
| 11 | 13.06 | wind | 3.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 12 | 13.06 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 17 | 13.06 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 18 | 13.06 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 19 | 13.06 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 20 | 13.07 | temperature | 15.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 21 | 13.07 | humidity | 80.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 24 | 13.07 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 26 | 13.07 | wind | 9.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 27 | 13.07 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 36 | 13.08 | temperature | 30.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 37 | 13.08 | humidity | 50.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 41 | 13.08 | radiation | 1.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 46 | 13.08 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 24 | 1 |
| 50 | 13.08 | temperature | 10.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 51 | 13.08 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 56 | 13.08 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 59 | 13.10 | wind | 7.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 62 | 13.10 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 63 | 13.10 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 66 | 13.11 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 69 | 13.11 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 73 | 13.11 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 83 | 13.11 | humidity | 90.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 84 | 13.11 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 86 | 13.11 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 106 | 13.11 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 110 | 13.11 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 115 | 13.12 | temperature | 25.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 118 | 13.12 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 119 | 13.12 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 125 | 13.13 | wind | 1.0 | 10 | < th | dose independent | rect. | 22 | 3 |
| 128 | 13.13 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 131 | 13.13 | wind | 1.0 | 10 | < th | dose dependent | rect. | 22 | 3 |
| 178 | 13.15 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 201 | 13.16 | wind | 1.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 209 | 13.17 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 8 |
| 215 | 13.17 | wind | 1.0 | 10 | < th | dose dependent | sin | 15 | NA |
| 219 | 13.17 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 227 | 13.18 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 234 | 13.18 | humidity | 90.0 | 10 | < th | dose independent | rect. | 24 | 5 |
| 262 | 13.19 | wind | 1.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 306 | 13.20 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 324 | 13.20 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 17 |
| 398 | 13.23 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 423 | 13.24 | wind | 1.0 | 10 | < th | dose independent | sin | 16 | NA |
| 506 | 13.25 | wind | 1.0 | 10 | < th | dose dependent | rect. | 17 | 16 |
| 522 | 13.25 | wind | 1.0 | 10 | < th | dose dependent | rect. | 2 | 23 |
| 549 | 13.26 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 22 | 8 |
| 625 | 13.27 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 628 | 13.27 | wind | 1.0 | 10 | < th | dose dependent | no | NA | NA |
| 754 | 13.28 | wind | 1.0 | 10 | > th | dose independent | sin | 17 | NA |
| 960 | 13.31 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |