Os04g0586000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF581 family protein.
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Os04g0586000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF581 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.85 | 0.467 | 13.7 | 0.341 | 1.66 | -0.715 | 0.0827 | 1.46 | -0.392 | 23.2 | 19.9 | 11 | -- | -- |
| 107.79 | 0.484 | 13.6 | 0.587 | 1.67 | -0.789 | 0.644 | -- | -0.345 | 23.3 | 19.91 | 15 | -- | -- |
| 98.87 | 0.463 | 13.7 | 0.335 | 1.66 | -0.713 | -- | 1.48 | -0.393 | 23.1 | 19.9 | 11 | -- | -- |
| 109.06 | 0.486 | 13.6 | 0.526 | 1.66 | -0.832 | -- | -- | -0.348 | 23.2 | 19.9 | 65 | -- | -- |
| 250.59 | 0.737 | 13.6 | 0.271 | -- | -0.632 | -- | 1.16 | -0.372 | -- | 20.8 | 636 | -- | -- |
| 132.21 | 0.539 | 13.6 | 0.782 | 1.52 | -- | 0.608 | -- | -0.205 | 23 | -- | -- | -- | -- |
| 133.76 | 0.542 | 13.6 | 0.758 | 1.52 | -- | -- | -- | -0.207 | 23 | -- | -- | -- | -- |
| 225.54 | 0.699 | 13.6 | 0.786 | -- | -0.916 | -- | -- | -0.421 | -- | 25.1 | 832 | -- | -- |
| 112.35 | 0.494 | 13.6 | -- | 1.67 | -1.19 | -- | -- | -0.387 | 23.3 | 19.04 | 133 | -- | -- |
| 276.91 | 0.778 | 13.6 | 0.791 | -- | -- | -- | -- | -0.195 | -- | -- | -- | -- | -- |
| 148.88 | 0.571 | 13.6 | -- | 1.52 | -- | -- | -- | -0.291 | 23 | -- | -- | -- | -- |
| 225.6 | 0.7 | 13.7 | -- | -- | -1.19 | -- | -- | -0.676 | -- | 25.3 | 822 | -- | -- |
| 293.42 | 0.8 | 13.6 | -- | -- | -- | -- | -- | -0.283 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.52 | temperature | 25 | 90 | < th | dose dependent | rect. | 12 | 19 |
| 5 | 89.16 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 19 |
| 48 | 92.19 | temperature | 20 | 90 | < th | dose independent | rect. | 12 | 18 |
| 58 | 92.75 | temperature | 20 | 90 | < th | dose independent | rect. | 12 | 21 |
| 71 | 93.29 | temperature | 20 | 10 | < th | dose independent | rect. | 12 | 22 |
| 167 | 95.20 | temperature | 20 | 90 | > th | dose independent | rect. | 7 | 22 |
| 229 | 96.52 | temperature | 20 | 90 | < th | dose independent | sin | 10 | NA |
| 262 | 97.49 | temperature | 20 | 10 | < th | dose independent | sin | 9 | NA |
| 278 | 97.81 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 7 |
| 281 | 97.85 | temperature | 20 | 10 | < th | dose independent | rect. | 22 | 22 |
| 299 | 98.00 | temperature | 25 | 90 | < th | dose dependent | sin | 11 | NA |
| 303 | 98.07 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 6 |
| 305 | 98.12 | temperature | 20 | 30 | > th | dose independent | rect. | 9 | 20 |
| 325 | 98.35 | temperature | 20 | 90 | < th | dose independent | rect. | 22 | 23 |
| 369 | 98.71 | temperature | 25 | 10 | < th | dose dependent | sin | 10 | NA |
| 382 | 98.85 | temperature | 20 | 90 | < th | dose independent | rect. | 7 | 23 |
| 429 | 99.30 | temperature | 20 | 30 | > th | dose independent | rect. | 9 | 23 |
| 432 | 99.32 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |
| 435 | 99.33 | temperature | 20 | 10 | < th | dose independent | rect. | 9 | 23 |
| 437 | 99.34 | temperature | 20 | 10 | < th | dose independent | rect. | 7 | 23 |
| 438 | 99.34 | temperature | 20 | 10 | < th | dose independent | rect. | 15 | 23 |
| 440 | 99.36 | temperature | 20 | 10 | < th | dose independent | rect. | 1 | 23 |
| 450 | 99.44 | temperature | 20 | 90 | < th | dose independent | no | NA | NA |
| 452 | 99.44 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 23 |
| 460 | 99.47 | temperature | 20 | 10 | < th | dose independent | rect. | 17 | 23 |
| 464 | 99.51 | temperature | 20 | 90 | > th | dose independent | sin | 14 | NA |
| 466 | 99.53 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 8 |
| 469 | 99.54 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 10 |
| 485 | 99.67 | temperature | 20 | 90 | > th | dose independent | no | NA | NA |
| 486 | 99.67 | temperature | 20 | 30 | < th | dose independent | rect. | 3 | 23 |
| 502 | 99.76 | temperature | 20 | 30 | < th | dose independent | rect. | 5 | 23 |
| 552 | 100.16 | temperature | 20 | 270 | > th | dose independent | rect. | 16 | 10 |
| 563 | 100.31 | temperature | 20 | 30 | > th | dose independent | rect. | 11 | 23 |
| 618 | 100.68 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 23 |
| 641 | 100.82 | temperature | 20 | 90 | > th | dose independent | rect. | 13 | 23 |
| 679 | 101.10 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 12 |
| 681 | 101.12 | temperature | 20 | 10 | < th | dose independent | rect. | 22 | 12 |
| 760 | 101.70 | temperature | 20 | 10 | < th | dose independent | rect. | 22 | 8 |
| 764 | 101.72 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 10 |
| 802 | 101.97 | wind | 1 | 43200 | > th | dose independent | rect. | 11 | 14 |
| 818 | 102.11 | wind | 1 | 43200 | < th | dose independent | rect. | 11 | 14 |
| 828 | 102.14 | wind | 3 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 855 | 102.27 | temperature | 20 | 30 | > th | dose independent | rect. | 11 | 18 |
| 890 | 102.48 | wind | 3 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 904 | 102.53 | wind | 5 | 43200 | < th | dose dependent | rect. | 15 | 2 |
| 948 | 102.74 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 13 |
| 961 | 102.80 | wind | 1 | 43200 | < th | dose dependent | rect. | 9 | 16 |
| 984 | 102.90 | temperature | 25 | 10 | < th | dose dependent | rect. | 22 | 9 |
| 988 | 102.92 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 993 | 102.94 | radiation | 10 | 14400 | > th | dose independent | rect. | 5 | 2 |