Os04g0581300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Mitochondrial import inner membrane translocase subunit TIM13.
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Os04g0581300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Mitochondrial import inner membrane translocase subunit TIM13.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.53 | 0.424 | 9.54 | -0.0573 | 0.592 | -0.427 | 0.331 | -1.92 | -0.297 | 16.8 | 20.01 | 1099 | -- | -- |
| 84.42 | 0.428 | 9.48 | 0.465 | 0.589 | -0.52 | 0.458 | -- | -0.148 | 16.9 | 21.99 | 1109 | -- | -- |
| 81.8 | 0.421 | 9.54 | -0.0573 | 0.587 | -0.424 | -- | -1.92 | -0.294 | 16.8 | 19.92 | 1129 | -- | -- |
| 84.72 | 0.429 | 9.49 | 0.457 | 0.591 | -0.533 | -- | -- | -0.169 | 16.9 | 23.15 | 1143 | -- | -- |
| 99.51 | 0.465 | 9.54 | -0.0801 | -- | -0.512 | -- | -1.98 | -0.296 | -- | 20.09 | 1213 | -- | -- |
| 92.4 | 0.451 | 9.51 | 0.281 | 0.632 | -- | 0.544 | -- | -0.268 | 16.2 | -- | -- | -- | -- |
| 93.21 | 0.452 | 9.51 | 0.286 | 0.637 | -- | -- | -- | -0.265 | 16.3 | -- | -- | -- | -- |
| 101.97 | 0.47 | 9.48 | 0.46 | -- | -0.608 | -- | -- | -0.177 | -- | 23.7 | 1213 | -- | -- |
| 89.63 | 0.441 | 9.5 | -- | 0.585 | -0.411 | -- | -- | -0.237 | 16.8 | 23.43 | 1152 | -- | -- |
| 115.03 | 0.501 | 9.5 | 0.261 | -- | -- | -- | -- | -0.282 | -- | -- | -- | -- | -- |
| 95.37 | 0.457 | 9.51 | -- | 0.631 | -- | -- | -- | -0.297 | 16.3 | -- | -- | -- | -- |
| 107.12 | 0.482 | 9.49 | -- | -- | -0.507 | -- | -- | -0.247 | -- | 23.9 | 1205 | -- | -- |
| 116.83 | 0.505 | 9.51 | -- | -- | -- | -- | -- | -0.311 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.88 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 3 | 78.03 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 9 |
| 5 | 78.20 | temperature | 20 | 720 | > th | dose dependent | sin | 14 | NA |
| 6 | 78.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 12 |
| 12 | 78.41 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 14 |
| 16 | 78.49 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 11 |
| 21 | 78.55 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 9 |
| 22 | 78.58 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 11 |
| 48 | 78.85 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 1 |
| 62 | 79.01 | temperature | 30 | 720 | < th | dose dependent | sin | 14 | NA |
| 71 | 79.04 | temperature | 10 | 720 | > th | dose dependent | sin | 13 | NA |
| 83 | 79.17 | temperature | 25 | 720 | < th | dose dependent | sin | 16 | NA |
| 113 | 79.38 | temperature | 25 | 720 | < th | dose independent | rect. | 16 | 15 |
| 208 | 79.89 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 212 | 79.90 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 16 |
| 225 | 79.94 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 13 |
| 237 | 80.00 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 326 | 80.34 | temperature | 25 | 720 | < th | dose independent | sin | 13 | NA |
| 328 | 80.35 | temperature | 20 | 270 | > th | dose independent | rect. | 10 | 22 |
| 343 | 80.41 | temperature | 25 | 720 | > th | dose independent | sin | 13 | NA |
| 361 | 80.46 | temperature | 25 | 4320 | > th | dose independent | rect. | 22 | 3 |
| 468 | 80.80 | temperature | 25 | 4320 | < th | dose independent | rect. | 22 | 5 |
| 567 | 81.07 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 570 | 81.08 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 603 | 81.15 | temperature | 20 | 10 | > th | dose independent | rect. | 14 | 19 |
| 655 | 81.26 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 3 |
| 672 | 81.30 | temperature | 20 | 90 | > th | dose independent | rect. | 23 | 9 |
| 739 | 81.39 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 8 |
| 763 | 81.43 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 862 | 81.57 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 11 |