Os04g0577300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to GDSL-motif lipase/hydrolase-like protein.
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Os04g0577300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to GDSL-motif lipase/hydrolase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.38 | 0.391 | 12 | -0.642 | 1.63 | -0.408 | -0.681 | -0.053 | 0.0499 | 22.1 | 24.19 | 306 | -- | -- |
| 68.97 | 0.387 | 12 | -0.651 | 1.66 | -0.436 | -0.634 | -- | 0.0592 | 22 | 22.9 | 371 | -- | -- |
| 70.51 | 0.391 | 12 | -0.599 | 1.66 | -0.439 | -- | -0.0921 | 0.0645 | 22 | 22.8 | 371 | -- | -- |
| 70.55 | 0.391 | 12 | -0.63 | 1.67 | -0.443 | -- | -- | 0.0566 | 22 | 22.89 | 371 | -- | -- |
| 181.24 | 0.627 | 11.9 | -0.563 | -- | -1.15 | -- | -0.211 | 0.0611 | -- | 25.8 | 752 | -- | -- |
| 79.98 | 0.419 | 12 | -0.501 | 1.68 | -- | -0.72 | -- | 0.224 | 21.8 | -- | -- | -- | -- |
| 81.96 | 0.424 | 12 | -0.473 | 1.68 | -- | -- | -- | 0.225 | 21.9 | -- | -- | -- | -- |
| 173.47 | 0.613 | 12 | -0.841 | -- | -1.23 | -- | -- | -0.218 | -- | 25.2 | 739 | -- | -- |
| 80.32 | 0.417 | 12 | -- | 1.65 | -0.359 | -- | -- | 0.167 | 22 | 22.6 | 390 | -- | -- |
| 250.48 | 0.74 | 11.9 | -0.455 | -- | -- | -- | -- | 0.224 | -- | -- | -- | -- | -- |
| 87.87 | 0.438 | 12 | -- | 1.68 | -- | -- | -- | 0.278 | 21.8 | -- | -- | -- | -- |
| 191.01 | 0.644 | 12 | -- | -- | -1.17 | -- | -- | -0.108 | -- | 25.23 | 736 | -- | -- |
| 255.95 | 0.747 | 11.9 | -- | -- | -- | -- | -- | 0.275 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.44 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 12 |
| 3 | 65.02 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 6 | 65.60 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 8 |
| 7 | 65.63 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 8 | 65.71 | temperature | 25 | 270 | < th | dose independent | rect. | 4 | 8 |
| 18 | 66.25 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 5 |
| 26 | 66.62 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 20 |
| 29 | 66.65 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 35 | 66.81 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 3 |
| 36 | 66.82 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 39 | 66.84 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 19 |
| 41 | 66.86 | temperature | 25 | 270 | < th | dose independent | rect. | 4 | 18 |
| 55 | 67.01 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 63 | 67.24 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 69 | 67.28 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 80 | 67.35 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 85 | 67.38 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 124 | 67.62 | atmosphere | 1015 | 43200 | > th | dose dependent | sin | 16 | NA |
| 138 | 67.65 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 194 | 67.85 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 214 | 67.92 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 254 | 68.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 255 | 68.12 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 285 | 68.23 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 21 |
| 286 | 68.24 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 288 | 68.24 | temperature | 25 | 270 | < th | dose dependent | sin | 0 | NA |
| 351 | 68.43 | humidity | 80 | 14400 | > th | dose dependent | rect. | 1 | 2 |
| 354 | 68.44 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 367 | 68.47 | temperature | 20 | 270 | > th | dose dependent | sin | 7 | NA |
| 373 | 68.48 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 377 | 68.49 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 11 | 7 |
| 408 | 68.55 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 458 | 68.62 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 10 |
| 473 | 68.63 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 541 | 68.69 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 602 | 68.73 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 604 | 68.73 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 15 | 9 |
| 688 | 68.77 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 775 | 68.80 | temperature | 25 | 270 | < th | dose independent | sin | 1 | NA |
| 779 | 68.80 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 815 | 68.81 | atmosphere | 1010 | 43200 | > th | dose dependent | no | NA | NA |
| 850 | 68.82 | atmosphere | 1015 | 43200 | > th | dose independent | sin | 16 | NA |
| 856 | 68.82 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 878 | 68.82 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 1 | 23 |
| 879 | 68.82 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 3 | 23 |
| 907 | 68.84 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 908 | 68.84 | radiation | 10 | 43200 | < th | dose independent | rect. | 16 | 1 |