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Os04g0576500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0232) R2 : 0.887
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.42 (0.0657) R2dC : 0.439 R2C : 0.706
β3 : -1.79 (0.0763) R2dE : 0.179 R2E : 0.447
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0477 (0.0491) R2dN8 : 0.000282 R2N8 : 0.00236
σ : 0.434
deviance : 86.94
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C
peak time of C : 15
E
wheather : temperature
threshold : 8.68
memory length : 282
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 2.93
open length of G : 2.57

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
82.41 0.427 11.1 -0.297 2.41 -1.82 -0.906 -1.5 -0.0865 15 9.247 282 2.85 2.73
85.09 0.43 11.1 -0.207 2.41 -1.81 -0.611 -- -0.0597 15 9.702 280 2.83 2.78
84.72 0.429 11.1 -0.282 2.42 -1.8 -- -0.981 -0.0872 15 9.178 282 2.85 2.72
85.89 0.432 11.1 -0.217 2.42 -1.82 -- -- -0.0639 15 9.403 280 2.86 2.73
254.7 0.743 11.1 -0.0841 -- -2.96 -- -0.491 -0.176 -- -18.35 272 0.0166 6.12
149.04 0.572 11.2 -0.298 3.34 -- -0.102 -- -0.222 16 -- -- -- --
149.07 0.572 11.2 -0.299 3.34 -- -- -- -0.222 16 -- -- -- --
249.77 0.736 11.1 -0.188 -- -2.96 -- -- -0.0328 -- -3.863 254 0.0167 6.48
86.94 0.434 11.1 -- 2.42 -1.79 -- -- -0.0477 15 8.68 282 2.93 2.57
759.51 1.29 11.1 -0.436 -- -- -- -- -0.311 -- -- -- -- --
151.43 0.576 11.2 -- 3.35 -- -- -- -0.189 16 -- -- -- --
245.18 0.729 11.1 -- -- -2.85 -- -- 0.0506 -- -5.12 421 0.00422 3.4
764.53 1.29 11.1 -- -- -- -- -- -0.263 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 83.97 temperature 10.0 270 > th dose dependent rect. 3 3
3 85.97 wind 9.0 270 < th dose dependent rect. 3 3
5 86.39 temperature 10.0 90 > th dose dependent rect. 3 5
8 86.83 humidity 50.0 270 > th dose dependent rect. 3 3
9 86.84 wind 9.0 270 < th dose independent rect. 6 21
10 86.92 wind 5.0 270 < th dose independent rect. 3 3
12 87.17 precipitation 0.1 270 < th dose independent rect. 3 3
13 87.17 precipitation 0.1 270 < th dose dependent rect. 3 3
25 87.90 wind 9.0 90 < th dose dependent rect. 3 5
27 88.03 radiation 10.0 270 < th dose independent rect. 3 3
29 88.13 radiation 20.0 270 < th dose dependent rect. 3 3
33 88.22 temperature 10.0 270 > th dose independent rect. 3 3
35 88.22 temperature 30.0 270 < th dose independent rect. 3 3
36 88.22 humidity 50.0 270 > th dose independent rect. 3 3
39 88.22 atmosphere 995.0 270 > th dose independent rect. 3 3
40 88.22 atmosphere 1015.0 270 < th dose independent rect. 3 3
44 88.22 temperature 10.0 270 > th dose independent rect. 6 21
66 88.82 wind 5.0 90 < th dose independent rect. 3 5
83 89.63 precipitation 0.1 90 < th dose independent rect. 3 5
84 89.63 precipitation 0.1 90 < th dose dependent rect. 3 5
87 89.75 wind 9.0 90 < th dose independent rect. 8 19
94 90.12 radiation 20.0 270 < th dose dependent rect. 2 5
96 90.16 radiation 10.0 270 < th dose independent rect. 2 5
100 90.32 temperature 10.0 90 > th dose independent rect. 3 5
102 90.32 temperature 30.0 90 < th dose independent rect. 3 5
103 90.32 humidity 50.0 90 > th dose independent rect. 3 5
105 90.32 atmosphere 995.0 90 > th dose independent rect. 3 5
106 90.32 atmosphere 1015.0 90 < th dose independent rect. 3 5
107 90.32 temperature 10.0 90 > th dose independent rect. 8 19
108 90.33 precipitation 0.1 270 < th dose independent rect. 6 21
109 90.33 precipitation 0.1 270 < th dose dependent rect. 6 21
110 90.37 radiation 40.0 90 < th dose independent rect. 3 5
139 90.93 temperature 10.0 10 > th dose dependent rect. 4 4
149 91.24 wind 9.0 10 < th dose dependent rect. 4 5
195 92.21 precipitation 0.1 90 < th dose independent rect. 8 19
197 92.21 precipitation 0.1 90 < th dose dependent rect. 8 19
219 92.65 wind 9.0 10 < th dose independent rect. 8 20
266 93.00 precipitation 0.1 10 < th dose independent rect. 4 4
267 93.00 precipitation 0.1 10 < th dose dependent rect. 4 4
275 93.08 temperature 10.0 10 > th dose independent rect. 4 4
277 93.08 temperature 30.0 10 < th dose independent rect. 4 4
278 93.08 humidity 50.0 10 > th dose independent rect. 4 4
280 93.08 atmosphere 995.0 10 > th dose independent rect. 4 4
281 93.08 atmosphere 1015.0 10 < th dose independent rect. 4 4
283 93.08 temperature 10.0 10 > th dose independent rect. 8 20
351 93.81 atmosphere 1015.0 270 < th dose dependent rect. 3 2
358 93.88 precipitation 0.1 10 < th dose independent rect. 8 20
359 93.88 precipitation 0.1 10 < th dose dependent rect. 8 20
431 95.25 temperature 15.0 270 > th dose independent rect. 14 16
453 95.56 atmosphere 995.0 90 > th dose independent rect. 8 19
468 95.99 humidity 50.0 270 > th dose independent rect. 6 20
534 97.35 temperature 15.0 270 > th dose independent rect. 11 10
553 97.54 wind 7.0 270 < th dose independent rect. 17 9
564 97.65 atmosphere 1015.0 10 < th dose dependent rect. 4 4
669 98.91 wind 1.0 270 > th dose independent rect. 7 19
683 99.07 atmosphere 995.0 270 > th dose independent rect. 6 20
692 99.14 humidity 50.0 270 > th dose independent rect. 6 8
801 100.21 precipitation 0.1 270 < th dose independent rect. 2 15
803 100.21 precipitation 0.1 270 < th dose dependent rect. 2 15
815 100.30 precipitation 0.1 270 < th dose independent rect. 17 9
816 100.30 precipitation 0.1 270 < th dose dependent rect. 17 9
817 100.31 radiation 10.0 270 < th dose independent rect. 17 9
835 100.40 wind 9.0 270 < th dose independent rect. 6 8
845 100.48 atmosphere 1015.0 270 < th dose independent rect. 11 10
846 100.49 precipitation 0.1 270 < th dose independent rect. 6 8
848 100.49 precipitation 0.1 270 < th dose dependent rect. 6 8
849 100.50 radiation 30.0 270 < th dose dependent rect. 17 9
854 100.52 temperature 15.0 10 > th dose independent rect. 15 17
871 100.66 humidity 50.0 270 > th dose independent rect. 21 14
883 100.77 temperature 10.0 270 > th dose independent rect. 6 8
884 100.77 atmosphere 995.0 270 > th dose independent rect. 6 8
885 100.77 atmosphere 1015.0 270 < th dose independent rect. 6 8
886 100.77 wind 9.0 270 < th dose independent rect. 21 14
896 100.83 atmosphere 1010.0 270 < th dose independent rect. 13 17
900 100.86 humidity 50.0 270 > th dose independent rect. 17 9
919 100.92 temperature 10.0 270 > th dose independent rect. 17 9
923 100.92 temperature 10.0 270 > th dose independent rect. 2 15
924 100.92 atmosphere 1015.0 270 < th dose independent rect. 2 15
955 101.13 temperature 10.0 270 > th dose independent rect. 21 14
956 101.13 atmosphere 995.0 270 > th dose independent rect. 21 14
972 101.21 atmosphere 1010.0 90 < th dose independent rect. 15 17