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Os04g0573000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Major facilitator superfamily MFS_1 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0623) R2 : 0.803
β1 : 1.44 (0.213) R2dD : 0.0394 R2D : -0.137
β2 : 3.74 (0.11) R2dC : 0.504 R2C : 0.321
β3 : -27.3 (2.44) R2dE : 3.14 R2E : -2.65
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -59 (5.32) R2dD*E : 2.97 R2D*E : -3.37
γ1 : 1.22 (0.0915) R2dN8 : 0.107 R2N8 : -0.0519
σ : 0.786
deviance : 285.13
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C
peak time of C : 5.51
E
wheather : radiation
threshold : 0.9874
memory length : 1347
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 8.97
open length of G : 3.08

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
282.88 0.79 10.4 1.44 3.74 -27.3 0.964 -59 1.23 5.54 1.011 1361 8.95 3.07
357.23 0.887 10.9 3.01 3.74 -1.97 0.998 -- 1.33 5.59 1.011 1361 8.95 3.07
285.13 0.786 10.4 1.44 3.74 -27.3 -- -59 1.22 5.51 0.9874 1347 8.97 3.08
320.57 0.834 10.9 2.59 3.79 -1.96 -- -- 1.21 5.53 0.8905 1646 10.2 3.32
1001.26 1.47 10.5 1.6 -- -27.2 -- -58.6 1.31 -- 0.8926 1120 9.02 3.27
361.05 0.891 10.9 3.03 3.74 -- 0.977 -- 1.34 5.58 -- -- -- --
363.37 0.893 10.9 3.04 3.75 -- -- -- 1.33 5.56 -- -- -- --
1039.59 1.5 11 2.76 -- -2.02 -- -- 1.26 -- 1.87 1745 10.7 3.34
360.94 0.885 10.9 -- 3.8 -2.11 -- -- 0.718 5.43 0.5047 30136 10.4 3.43
1092.93 1.54 11 3.16 -- -- -- -- 1.42 -- -- -- -- --
606.55 1.15 11 -- 3.8 -- -- -- 0.995 5.52 -- -- -- --
1074.66 1.53 11.1 -- -- -2.24 -- -- 0.664 -- 0.9516 30056 10.6 3.84
1356.32 1.72 11 -- -- -- -- -- 1.07 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 277.53 humidity 90 14400 < th dose dependent rect. 5 2
6 286.10 humidity 90 14400 < th dose dependent rect. 1 7
11 286.93 humidity 50 14400 > th dose dependent rect. 6 1
14 287.15 humidity 70 14400 > th dose independent rect. 21 1
15 287.15 radiation 1 14400 < th dose dependent rect. 9 1
16 287.53 radiation 1 1440 < th dose independent rect. 9 3
17 287.53 radiation 1 1440 < th dose dependent rect. 9 3
19 287.86 radiation 1 1440 < th dose independent rect. 8 5
20 287.86 radiation 1 1440 < th dose dependent rect. 8 5
29 288.72 radiation 1 1440 < th dose independent rect. 8 7
30 288.72 radiation 1 1440 < th dose dependent rect. 8 7
33 289.09 wind 1 43200 > th dose independent rect. 20 1
35 289.14 wind 1 43200 < th dose independent rect. 20 1
43 289.75 radiation 1 1440 > th dose independent rect. 4 1
53 289.75 radiation 1 1440 > th dose dependent rect. 4 1
64 289.80 radiation 1 1440 > th dose independent rect. 13 2
65 289.82 radiation 1 1440 > th dose independent rect. 8 7
66 289.83 radiation 10 14400 < th dose dependent rect. 4 1
95 290.43 radiation 1 1440 > th dose independent rect. 11 4
112 291.09 radiation 1 1440 < th dose independent rect. 13 2
113 291.09 radiation 1 1440 < th dose dependent rect. 13 2
114 291.23 radiation 1 14400 < th dose independent rect. 4 1
123 291.78 radiation 10 14400 < th dose dependent rect. 24 5
124 291.80 radiation 10 14400 < th dose dependent rect. 21 8
130 292.32 wind 9 14400 > th dose dependent rect. 14 1
142 292.92 humidity 70 14400 > th dose independent rect. 21 9
145 293.03 radiation 1 14400 < th dose independent rect. 8 2
154 293.22 humidity 70 14400 > th dose independent rect. 20 11
176 293.44 temperature 15 14400 < th dose dependent rect. 4 1
177 293.47 radiation 1 14400 > th dose independent rect. 8 2
184 293.66 humidity 60 14400 > th dose independent rect. 4 4
186 293.79 humidity 70 14400 < th dose independent rect. 20 11
187 293.81 humidity 70 14400 < th dose independent rect. 20 1
194 294.05 humidity 70 14400 < th dose dependent rect. 21 1
213 294.37 radiation 40 14400 > th dose independent rect. 15 1
229 294.39 humidity 80 14400 < th dose independent rect. 22 5
263 295.04 temperature 15 43200 > th dose independent rect. 12 1
278 295.28 humidity 70 14400 < th dose dependent rect. 20 11
283 295.33 radiation 1 14400 < th dose independent rect. 24 5
285 295.37 temperature 15 14400 < th dose dependent rect. 23 1
297 295.55 radiation 40 14400 > th dose dependent rect. 15 1
314 295.56 radiation 1 14400 < th dose independent rect. 21 8
323 295.67 temperature 15 14400 < th dose independent rect. 9 3
339 295.99 temperature 15 14400 > th dose independent rect. 9 4
346 296.07 temperature 15 43200 < th dose independent rect. 10 7
355 296.18 humidity 60 43200 < th dose dependent rect. 18 1
366 296.29 temperature 15 43200 < th dose independent rect. 11 3
377 296.35 temperature 15 43200 < th dose independent rect. 7 6
378 296.35 temperature 15 43200 > th dose independent rect. 10 7
395 296.43 temperature 15 43200 > th dose independent rect. 11 3
399 296.45 temperature 15 14400 < th dose dependent sin 10 NA
450 296.67 temperature 15 43200 > th dose independent rect. 8 9
454 296.70 temperature 15 43200 < th dose independent rect. 12 1
481 296.82 humidity 80 14400 < th dose independent rect. 1 2
611 297.48 wind 7 4320 > th dose independent rect. 17 1
673 297.80 humidity 60 14400 < th dose independent rect. 6 1
677 297.80 radiation 20 14400 > th dose independent rect. 17 1
728 297.80 humidity 60 14400 < th dose dependent rect. 6 1
732 297.80 radiation 20 14400 > th dose dependent rect. 17 1
831 298.06 humidity 80 14400 > th dose independent rect. 24 3
837 298.08 humidity 50 14400 < th dose dependent rect. 9 1
839 298.11 temperature 15 43200 < th dose independent sin 22 NA
844 298.12 temperature 15 43200 < th dose independent rect. 7 16
845 298.13 radiation 10 14400 < th dose independent rect. 18 11
902 298.33 humidity 80 14400 > th dose independent rect. 21 14
921 298.38 humidity 80 14400 > th dose independent rect. 1 1
925 298.40 humidity 80 14400 < th dose dependent rect. 24 1
946 298.47 humidity 80 43200 > th dose dependent rect. 23 1
952 298.51 temperature 15 43200 > th dose independent rect. 7 16
955 298.52 temperature 15 43200 > th dose independent rect. 15 1
974 298.58 humidity 80 14400 < th dose independent rect. 17 15
978 298.60 radiation 1 1440 > th dose independent rect. 9 1
981 298.60 temperature 15 14400 < th dose dependent no NA NA
989 298.65 radiation 10 14400 < th dose independent rect. 18 1
995 298.70 temperature 15 43200 > th dose independent sin 22 NA