Os04g0572700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Zfwd1 protein (Fragment).
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Os04g0572700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Zfwd1 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 209.65 | 0.68 | 6.98 | -2.05 | 1.18 | -4.28 | 1.23 | -1.47 | -0.591 | 1.7 | 26.42 | 134 | -- | -- |
| 212.23 | 0.678 | 7 | -2.23 | 1.16 | -4.1 | 0.962 | -- | -0.621 | 1.59 | 26.76 | 137 | -- | -- |
| 213.96 | 0.681 | 7 | -2.23 | 1.13 | -4.19 | -- | -0.552 | -0.62 | 1.49 | 26.35 | 138 | -- | -- |
| 214.36 | 0.682 | 7 | -2.31 | 1.15 | -4.13 | -- | -- | -0.626 | 1.55 | 26.54 | 137 | -- | -- |
| 251.73 | 0.739 | 6.95 | -2.09 | -- | -3.86 | -- | -0.779 | -0.459 | -- | 24.99 | 308 | -- | -- |
| 459.59 | 1.01 | 6.81 | -1.29 | 0.452 | -- | -0.392 | -- | 0.263 | 21 | -- | -- | -- | -- |
| 459.94 | 1 | 6.81 | -1.28 | 0.452 | -- | -- | -- | 0.261 | 21.5 | -- | -- | -- | -- |
| 252.29 | 0.74 | 6.97 | -2.22 | -- | -3.74 | -- | -- | -0.503 | -- | 25.35 | 323 | -- | -- |
| 340.28 | 0.864 | 6.92 | -- | 1.04 | -3.15 | -- | -- | -0.192 | 0.157 | 26.07 | 139 | -- | -- |
| 471.96 | 1.02 | 6.8 | -1.28 | -- | -- | -- | -- | 0.26 | -- | -- | -- | -- | -- |
| 503.03 | 1.05 | 6.78 | -- | 0.451 | -- | -- | -- | 0.404 | 21.3 | -- | -- | -- | -- |
| 369.12 | 0.895 | 6.88 | -- | -- | -2.87 | -- | -- | -0.117 | -- | 25.6 | 310 | -- | -- |
| 514.87 | 1.06 | 6.77 | -- | -- | -- | -- | -- | 0.402 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 213.83 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 2 | 214.41 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 3 | 215.24 | temperature | 25 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 4 | 215.46 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 5 | 215.48 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 10 | 217.57 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 16 | 218.71 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 17 | 218.88 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 27 | 220.38 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 41 | 220.88 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 42 | 220.98 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 50 | 222.58 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 17 |
| 144 | 231.38 | temperature | 25 | 720 | < th | dose dependent | sin | 20 | NA |
| 475 | 248.68 | temperature | 15 | 720 | > th | dose dependent | sin | 16 | NA |
| 495 | 249.49 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 506 | 249.93 | temperature | 15 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 520 | 250.52 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 575 | 252.01 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 593 | 252.59 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 683 | 254.68 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 806 | 256.74 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 834 | 257.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 20 |
| 853 | 257.47 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 962 | 258.52 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 11 |
| 984 | 258.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 993 | 258.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 13 |