FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0570600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.95 (0.0268) R2 : 0.00112
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0404 (0.0564) R2dN8 : 0.00145 R2N8 : 0.00112
σ : 0.505
deviance : 116.97
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
103.98 0.479 2.94 0.171 0.106 0.725 -0.699 2.54 -0.0157 7.34 61.53 15 -- --
108.7 0.486 2.93 0.233 0.123 1.09 -0.567 -- 0.0112 6.7 59.99 15 -- --
105.1 0.477 2.94 0.155 0.122 0.747 -- 2.43 -0.0155 5.57 61.42 15 -- --
109.47 0.487 2.94 0.205 0.125 1.06 -- -- -0.000768 5.39 59.9 15 -- --
105.87 0.479 2.95 0.159 -- 0.741 -- 2.44 -0.0115 -- 61.42 15 -- --
114.05 0.501 2.95 0.223 0.123 -- -0.606 -- -0.0206 6.55 -- -- -- --
114.97 0.502 2.94 0.215 0.12 -- -- -- -0.0186 6.87 -- -- -- --
110.24 0.489 2.94 0.207 -- 1.05 -- -- 0.00127 -- 59.93 15 -- --
110.52 0.49 2.95 -- 0.126 1.09 -- -- -0.0242 5.19 60 15 -- --
115.72 0.503 2.95 0.217 -- -- -- -- -0.0163 -- -- -- -- --
116.18 0.504 2.95 -- 0.123 -- -- -- -0.0425 6.76 -- -- -- --
111.35 0.491 2.95 -- -- 1.07 -- -- -0.0219 -- 60 15 -- --
116.97 0.505 2.95 -- -- -- -- -- -0.0404 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 102.99 wind 1.0 90 < th dose dependent rect. 2 2
3 103.95 precipitation 0.1 270 > th dose independent rect. 8 1
4 103.95 precipitation 0.1 720 > th dose independent rect. 9 4
5 103.95 precipitation 0.1 270 > th dose dependent rect. 8 1
6 103.95 precipitation 0.1 720 > th dose dependent rect. 9 4
13 103.99 wind 1.0 270 < th dose dependent rect. 21 1
16 104.00 humidity 90.0 720 > th dose independent rect. 10 1
26 104.02 humidity 90.0 720 > th dose dependent rect. 10 1
36 104.17 wind 1.0 90 < th dose independent rect. 2 2
37 104.53 wind 1.0 14400 < th dose dependent rect. 21 1
47 104.63 wind 1.0 90 < th dose dependent rect. 21 7
49 104.68 wind 1.0 90 < th dose dependent rect. 11 1
51 104.97 wind 1.0 90 < th dose dependent rect. 17 11
56 105.01 wind 1.0 90 < th dose dependent rect. 14 14
59 105.08 wind 1.0 10 < th dose dependent rect. 11 2
65 105.44 wind 1.0 90 < th dose independent rect. 11 1
73 105.71 wind 9.0 1440 > th dose dependent rect. 17 1
79 105.89 atmosphere 1000.0 10 < th dose dependent rect. 16 8
81 105.90 wind 1.0 270 < th dose independent rect. 19 1
83 105.90 wind 1.0 270 < th dose dependent rect. 19 1
91 105.99 atmosphere 1000.0 270 < th dose independent rect. 20 1
92 105.99 atmosphere 1000.0 270 < th dose dependent rect. 20 1
129 106.06 atmosphere 1000.0 10 < th dose independent rect. 16 9
152 106.10 wind 1.0 90 < th dose independent rect. 21 7
164 106.16 atmosphere 1000.0 90 < th dose independent rect. 22 1
165 106.16 atmosphere 1000.0 10 < th dose independent rect. 23 1
182 106.17 wind 9.0 1440 > th dose independent rect. 17 1
185 106.17 atmosphere 1000.0 10 < th dose independent rect. 18 7
203 106.18 wind 9.0 720 > th dose dependent rect. 17 9
218 106.19 wind 9.0 720 > th dose dependent rect. 17 6
244 106.27 temperature 25.0 270 < th dose dependent rect. 10 1
248 106.29 precipitation 0.1 720 > th dose independent rect. 6 1
250 106.29 precipitation 0.1 720 > th dose dependent rect. 6 1
262 106.34 wind 9.0 1440 < th dose independent rect. 17 1
270 106.36 atmosphere 1000.0 30 < th dose independent sin 12 NA
276 106.38 wind 1.0 14400 < th dose independent rect. 21 1
286 106.39 wind 1.0 90 < th dose independent rect. 17 11
326 106.44 atmosphere 1000.0 270 < th dose independent rect. 19 11
336 106.46 wind 1.0 10 < th dose independent rect. 11 1
390 106.53 atmosphere 1000.0 30 > th dose independent sin 13 NA
439 106.64 wind 9.0 1440 < th dose independent rect. 17 3
551 106.84 wind 9.0 720 > th dose dependent sin 12 NA
572 106.87 wind 9.0 1440 > th dose dependent rect. 14 1
582 106.88 wind 9.0 1440 > th dose dependent rect. 14 4
623 106.99 wind 9.0 720 > th dose independent rect. 17 9
639 107.02 wind 9.0 720 > th dose independent rect. 17 6
654 107.05 atmosphere 1000.0 30 < th dose dependent sin 11 NA
682 107.15 wind 1.0 90 < th dose independent rect. 11 17
738 107.29 wind 3.0 90 > th dose independent rect. 6 1
751 107.30 wind 9.0 720 > th dose dependent rect. 14 12
760 107.31 wind 9.0 720 > th dose dependent rect. 14 9
769 107.33 wind 1.0 270 < th dose independent rect. 21 1
783 107.36 wind 1.0 14400 > th dose independent rect. 21 1
829 107.42 wind 3.0 30 > th dose dependent rect. 6 2
870 107.52 wind 9.0 1440 > th dose independent rect. 14 1
912 107.61 wind 5.0 10 > th dose independent rect. 7 2
924 107.61 wind 1.0 270 < th dose dependent rect. 10 12