Os04g0569400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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Os04g0569400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.61 | 0.264 | 2.8 | 0.00845 | 0.0963 | -0.109 | 0.0542 | -0.0154 | 0.00119 | 6.48 | 91 | 218 | -- | -- |
| 31.61 | 0.262 | 2.8 | 0.00751 | 0.0958 | -0.109 | 0.0472 | -- | 0.000758 | 6.48 | 91.14 | 215 | -- | -- |
| 31.61 | 0.262 | 2.8 | 0.0078 | 0.0955 | -0.109 | -- | 0.00205 | 0.000726 | 6.41 | 91.22 | 215 | -- | -- |
| 31.61 | 0.262 | 2.8 | 0.00803 | 0.0956 | -0.109 | -- | -- | 0.000788 | 6.41 | 91.15 | 215 | -- | -- |
| 31.96 | 0.263 | 2.8 | 0.0021 | -- | -0.0628 | -- | 0.00882 | 0.0124 | -- | 91.01 | 209 | -- | -- |
| 32.03 | 0.265 | 2.79 | -0.00954 | 0.0469 | -- | 0.0778 | -- | 0.0253 | 9.8 | -- | -- | -- | -- |
| 32.05 | 0.265 | 2.79 | -0.00685 | 0.0476 | -- | -- | -- | 0.0252 | 9.24 | -- | -- | -- | -- |
| 31.93 | 0.264 | 2.8 | 0.00491 | -- | -0.0553 | -- | -- | 0.013 | -- | 90.51 | 198 | -- | -- |
| 31.61 | 0.262 | 2.8 | -- | 0.0953 | -0.108 | -- | -- | 0.000134 | 6.42 | 91.09 | 215 | -- | -- |
| 32.18 | 0.265 | 2.8 | -0.00704 | -- | -- | -- | -- | 0.0255 | -- | -- | -- | -- | -- |
| 32.05 | 0.265 | 2.79 | -- | 0.0476 | -- | -- | -- | 0.026 | 9.25 | -- | -- | -- | -- |
| 31.93 | 0.264 | 2.8 | -- | -- | -0.055 | -- | -- | 0.0125 | -- | 90.51 | 198 | -- | -- |
| 32.19 | 0.265 | 2.79 | -- | -- | -- | -- | -- | 0.0262 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.23 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 3 | 29.23 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 5 | 29.28 | wind | 1.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 8 | 29.32 | wind | 1.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 9 | 29.35 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 10 | 29.46 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 11 | 1 |
| 13 | 30.05 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 27 | 30.06 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 18 | 16 |
| 28 | 30.07 | temperature | 30.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 139 | 30.24 | radiation | 10.0 | 90 | < th | dose independent | rect. | 11 | 1 |
| 175 | 30.37 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 225 | 30.48 | wind | 3.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 232 | 30.61 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 257 | 30.68 | wind | 3.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 273 | 30.86 | wind | 9.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 277 | 30.86 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 281 | 30.87 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 322 | 31.00 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 332 | 31.03 | temperature | 30.0 | 30 | > th | dose independent | rect. | 16 | 19 |
| 469 | 31.20 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 598 | 31.31 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 24 | 9 |
| 612 | 31.32 | humidity | 70.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 647 | 31.34 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 662 | 31.35 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 1 | 9 |
| 688 | 31.37 | temperature | 30.0 | 90 | > th | dose independent | sin | 10 | NA |
| 689 | 31.37 | radiation | 10.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 692 | 31.37 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 1 | 6 |
| 698 | 31.37 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 15 |
| 700 | 31.38 | temperature | 30.0 | 10 | > th | dose independent | sin | 9 | NA |
| 701 | 31.38 | atmosphere | 1000.0 | 270 | > th | dose independent | sin | 4 | NA |
| 718 | 31.38 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 720 | 31.39 | atmosphere | 1000.0 | 270 | < th | dose independent | sin | 3 | NA |
| 729 | 31.39 | temperature | 25.0 | 90 | > th | dose independent | rect. | 3 | 13 |
| 735 | 31.39 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 736 | 31.39 | atmosphere | 1000.0 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 759 | 31.40 | radiation | 30.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 791 | 31.41 | wind | 7.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 792 | 31.41 | radiation | 20.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 961 | 31.42 | atmosphere | 1000.0 | 720 | > th | dose independent | sin | 8 | NA |
| 963 | 31.42 | wind | 7.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 987 | 31.43 | atmosphere | 1000.0 | 720 | < th | dose independent | sin | 7 | NA |
| 991 | 31.43 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 3 | 2 |