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Os04g0568800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF810 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.04 (0.0269) R2 : 0.299
β1 : 1.37 (0.0985) R2dD : 0.31 R2D : 0.285
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.146 (0.0574) R2dN8 : 0.0134 R2N8 : -0.0112
σ : 0.505
deviance : 116.69
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
87.99 0.441 6.85 2.93 0.341 -1.15 -0.461 5.6 0.476 7.06 26.13 1255 -- --
95.78 0.456 7.03 1.55 0.337 -0.59 -0.538 -- 0.158 7.06 26.4 1162 -- --
88.45 0.438 6.85 2.96 0.339 -1.17 -- 5.9 0.466 7.18 26.35 1235 -- --
96.47 0.457 7.03 1.54 0.349 -0.572 -- -- 0.164 7.38 26.32 1183 -- --
91.3 0.445 6.89 2.67 -- -1.29 -- 5.84 0.449 -- 25.56 942 -- --
108.42 0.488 7.03 1.38 0.379 -- -0.325 -- 0.142 8.26 -- -- -- --
108.7 0.488 7.03 1.37 0.377 -- -- -- 0.143 8.53 -- -- -- --
100.18 0.466 7.03 1.55 -- -0.749 -- -- 0.196 -- 25.4 916 -- --
154.93 0.58 7.07 -- 0.372 -0.275 -- -- -0.0476 7.5 28.42 1172 -- --
116.69 0.505 7.04 1.37 -- -- -- -- 0.146 -- -- -- -- --
158.24 0.588 7.06 -- 0.384 -- -- -- -0.00976 8.26 -- -- -- --
160.56 0.59 7.07 -- -- -0.439 -- -- -0.0102 -- 26.4 871 -- --
166.38 0.602 7.07 -- -- -- -- -- -0.00578 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 86.65 wind 9 43200 < th dose dependent rect. 12 1
2 86.74 wind 1 43200 > th dose dependent rect. 12 1
3 86.97 humidity 80 43200 > th dose independent rect. 4 1
6 87.25 humidity 80 43200 < th dose dependent rect. 22 1
8 87.32 humidity 80 43200 < th dose independent rect. 3 2
17 87.51 humidity 80 43200 < th dose dependent rect. 22 3
20 87.57 humidity 80 43200 < th dose dependent rect. 24 1
22 87.64 radiation 20 14400 < th dose independent rect. 3 3
24 87.68 wind 1 43200 > th dose dependent rect. 11 3
29 87.79 wind 3 43200 > th dose independent rect. 11 2
31 87.82 humidity 80 43200 < th dose independent rect. 23 7
42 87.94 humidity 80 43200 < th dose independent rect. 24 1
61 88.11 wind 3 43200 < th dose dependent rect. 24 4
63 88.14 wind 3 43200 < th dose independent rect. 2 12
75 88.22 wind 3 43200 > th dose independent rect. 2 13
78 88.24 wind 3 43200 < th dose independent rect. 2 2
79 88.25 radiation 1 4320 < th dose independent rect. 18 9
88 88.30 radiation 1 4320 < th dose independent rect. 18 7
98 88.33 radiation 1 4320 < th dose independent rect. 18 3
116 88.44 wind 1 43200 > th dose dependent rect. 3 13
117 88.44 wind 1 43200 > th dose dependent rect. 24 16
144 88.60 wind 9 43200 < th dose dependent rect. 24 17
149 88.61 wind 9 43200 < th dose dependent rect. 3 14
156 88.64 temperature 25 1440 > th dose dependent rect. 16 2
166 88.71 radiation 1 4320 > th dose independent rect. 18 1
184 88.75 wind 3 43200 > th dose independent rect. 2 2
190 88.76 temperature 25 1440 > th dose dependent rect. 11 12
201 88.80 wind 1 43200 < th dose dependent rect. 1 1
217 88.86 temperature 25 1440 > th dose dependent rect. 13 10
219 88.87 wind 3 43200 > th dose independent sin 4 NA
226 88.88 wind 3 43200 < th dose independent sin 4 NA
227 88.89 wind 3 43200 < th dose independent rect. 11 2
236 88.91 temperature 25 1440 > th dose dependent sin 17 NA
245 88.93 humidity 90 14400 > th dose independent rect. 19 9
251 88.95 radiation 30 14400 < th dose independent rect. 16 5
265 88.98 radiation 30 14400 < th dose independent rect. 16 11
274 89.00 wind 1 43200 > th dose dependent sin 2 NA
299 89.04 radiation 30 14400 < th dose independent rect. 16 9
310 89.07 radiation 30 14400 < th dose independent rect. 16 1
349 89.13 wind 9 43200 < th dose dependent sin 2 NA
371 89.17 wind 3 43200 > th dose independent rect. 8 6
391 89.20 wind 9 43200 > th dose dependent rect. 10 5
410 89.24 wind 3 43200 > th dose independent rect. 2 5
413 89.24 humidity 90 14400 > th dose dependent rect. 19 9
540 89.44 humidity 70 14400 < th dose independent rect. 18 14
544 89.45 wind 9 43200 < th dose independent rect. 9 5
574 89.49 wind 3 43200 < th dose independent rect. 9 4
585 89.52 wind 9 43200 > th dose independent rect. 9 5
606 89.55 wind 3 43200 < th dose independent rect. 1 9
642 89.60 wind 7 43200 > th dose dependent rect. 8 8
663 89.63 wind 7 43200 > th dose dependent rect. 5 11
673 89.65 wind 9 43200 < th dose independent rect. 2 13
674 89.65 wind 9 43200 < th dose independent rect. 24 15
697 89.68 wind 7 14400 < th dose independent rect. 11 1
701 89.69 wind 9 43200 > th dose independent rect. 8 7
703 89.69 wind 3 43200 < th dose independent rect. 20 18
748 89.74 wind 9 43200 < th dose independent rect. 5 10
760 89.75 radiation 1 14400 < th dose dependent rect. 19 10
801 89.80 temperature 25 1440 > th dose dependent no NA NA
845 89.85 wind 7 43200 > th dose dependent rect. 24 16
850 89.86 wind 3 43200 > th dose independent rect. 20 18
856 89.86 temperature 25 1440 > th dose dependent rect. 20 23
896 89.90 wind 9 43200 > th dose independent rect. 24 15
900 89.91 wind 3 43200 > th dose independent rect. 1 9
919 89.93 radiation 1 1440 < th dose dependent rect. 18 9
925 89.94 radiation 1 14400 < th dose dependent rect. 23 6
931 89.94 temperature 25 1440 > th dose dependent rect. 16 23
935 89.95 wind 9 43200 > th dose independent rect. 2 13
960 89.97 humidity 90 14400 > th dose dependent sin 12 NA
964 89.97 radiation 1 1440 < th dose dependent rect. 18 7