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Os04g0568700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Heat stress transcription factor Spl7 (Heat shock transcription factor) (Heat shock factor RHSF10).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.56 (0.0376) R2 : 0.813
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.62 (0.0937) R2dC : 0.62 R2C : 0.55
β3 : 3.04 (0.121) R2dE : 0.266 R2E : 0.194
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0901 (0.0797) R2dN8 : 0.00072 R2N8 : -0.00751
σ : 0.703
deviance : 227.61
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C
peak time of C : 8.93
E
wheather : temperature
threshold : 10.68
memory length : 17
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.95
open length of G : 19.9

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
212.79 0.685 9.53 0.725 3.64 2.76 0.864 1.06 0.0267 9.06 9.974 10 6.05 19.9
214.32 0.682 9.54 0.667 3.65 2.79 0.913 -- 0.00355 9.04 9.312 11 6.03 19.9
215.26 0.683 9.53 0.768 3.65 2.73 -- 1.12 0.0345 9.07 9.268 10 6.05 19.9
216.28 0.685 9.54 0.691 3.63 2.82 -- -- 0.015 9.06 8.778 14 5.98 19.9
338.88 0.857 9.48 1.39 -- 3.86 -- 2.81 0.382 -- 4.089 5 5.35 10.6
328.21 0.849 9.47 0.969 3.72 -- 1.09 -- 0.373 10.9 -- -- -- --
333.17 0.855 9.47 1.01 3.72 -- -- -- 0.376 10.9 -- -- -- --
308.31 0.818 9.57 0.89 -- 3.83 -- -- 0.28 -- 4.38 30 5.27 10.6
227.61 0.703 9.56 -- 3.62 3.04 -- -- -0.0901 8.93 10.68 17 5.95 19.9
1190.75 1.61 9.57 0.934 -- -- -- -- 0.352 -- -- -- -- --
360.19 0.888 9.5 -- 3.71 -- -- -- 0.264 10.8 -- -- -- --
317.73 0.83 9.58 -- -- 3.89 -- -- 0.208 -- 3.357 46 5.52 10.3
1213.76 1.63 9.59 -- -- -- -- -- 0.248 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 217.96 temperature 10.0 10 > th dose dependent rect. 6 19
8 227.24 radiation 10.0 30 < th dose dependent sin 3 NA
10 227.90 temperature 30.0 10 < th dose dependent rect. 2 14
18 231.00 radiation 10.0 90 < th dose dependent rect. 1 14
32 233.71 radiation 10.0 30 < th dose dependent rect. 7 23
52 237.48 radiation 10.0 30 < th dose dependent rect. 9 23
54 237.49 radiation 10.0 30 < th dose dependent rect. 11 23
55 237.60 radiation 10.0 30 < th dose dependent no NA NA
56 237.64 radiation 10.0 30 < th dose dependent rect. 13 23
58 237.84 radiation 20.0 10 < th dose dependent rect. 10 20
60 238.01 radiation 10.0 30 < th dose dependent rect. 15 23
85 239.47 radiation 1.0 90 > th dose independent sin 3 NA
88 239.59 radiation 1.0 90 < th dose independent sin 3 NA
111 240.41 radiation 10.0 30 < th dose dependent rect. 17 23
154 242.30 radiation 1.0 90 < th dose independent rect. 1 15
223 245.18 radiation 10.0 90 < th dose dependent rect. 1 18
244 246.20 temperature 25.0 30 < th dose independent rect. 2 16
246 246.25 temperature 15.0 10 > th dose dependent rect. 6 12
255 246.70 temperature 25.0 30 < th dose independent rect. 2 14
262 246.95 radiation 1.0 90 < th dose independent rect. 1 18
288 247.76 radiation 10.0 30 < th dose dependent rect. 1 23
303 248.13 temperature 10.0 90 > th dose dependent rect. 5 12
326 249.17 temperature 10.0 10 > th dose dependent sin 4 NA
358 250.17 temperature 15.0 90 > th dose dependent rect. 5 6
362 250.26 temperature 15.0 270 > th dose independent rect. 3 22
363 250.35 atmosphere 1015.0 1440 < th dose independent rect. 3 4
384 250.95 wind 9.0 90 < th dose dependent rect. 6 11
394 251.28 temperature 15.0 10 > th dose dependent rect. 6 6
399 251.58 temperature 30.0 10 < th dose dependent sin 3 NA
444 252.55 temperature 15.0 10 > th dose dependent rect. 6 8
449 252.59 temperature 15.0 90 > th dose independent rect. 6 19
451 252.64 radiation 10.0 90 < th dose dependent rect. 23 23
454 252.68 temperature 20.0 90 > th dose independent rect. 5 12
459 252.81 radiation 20.0 10 < th dose dependent rect. 2 4
474 253.08 humidity 80.0 10 > th dose dependent rect. 2 14
495 253.49 radiation 10.0 30 < th dose independent rect. 7 23
508 253.91 radiation 10.0 30 < th dose dependent rect. 21 23
549 254.95 temperature 25.0 30 > th dose independent sin 5 NA
610 255.80 humidity 90.0 10 < th dose independent rect. 6 12
622 255.95 temperature 30.0 10 < th dose dependent rect. 2 4
643 256.24 wind 9.0 90 < th dose dependent rect. 5 20
647 256.29 humidity 60.0 10 > th dose dependent rect. 2 13
649 256.31 wind 9.0 10 < th dose independent rect. 6 20
655 256.37 radiation 10.0 30 < th dose independent rect. 12 18
660 256.40 wind 7.0 270 < th dose independent rect. 1 2
669 256.47 temperature 25.0 30 < th dose independent sin 5 NA
676 256.56 precipitation 0.1 270 < th dose independent rect. 1 2
677 256.56 precipitation 0.1 270 < th dose dependent rect. 1 2
682 256.64 temperature 10.0 270 > th dose independent rect. 1 2
684 256.64 temperature 30.0 270 < th dose independent rect. 1 2
685 256.64 humidity 50.0 270 > th dose independent rect. 1 2
688 256.64 atmosphere 995.0 270 > th dose independent rect. 1 2
689 256.64 atmosphere 1010.0 270 < th dose independent rect. 1 2
691 256.64 radiation 1.0 270 < th dose independent rect. 1 2
698 256.64 radiation 1.0 270 < th dose dependent rect. 1 2
722 256.92 wind 7.0 10 < th dose independent rect. 2 4
723 256.96 radiation 10.0 30 < th dose independent rect. 10 20
724 256.98 wind 9.0 270 < th dose dependent rect. 4 10
733 257.08 temperature 10.0 10 > th dose independent rect. 2 4
735 257.08 temperature 30.0 10 < th dose independent rect. 2 4
736 257.08 humidity 50.0 10 > th dose independent rect. 2 4
739 257.08 atmosphere 995.0 10 > th dose independent rect. 2 4
740 257.08 atmosphere 1010.0 10 < th dose independent rect. 2 4
742 257.08 radiation 20.0 10 < th dose independent rect. 2 4
745 257.08 temperature 10.0 10 > th dose independent rect. 6 20
755 257.20 wind 7.0 30 < th dose dependent rect. 6 8
765 257.35 temperature 20.0 90 > th dose independent rect. 5 6
836 258.20 radiation 1.0 90 > th dose independent rect. 5 12
873 258.32 precipitation 0.1 30 < th dose independent rect. 2 4
875 258.32 precipitation 0.1 30 < th dose dependent rect. 2 4
913 258.68 wind 7.0 30 < th dose dependent rect. 6 6
941 258.96 wind 1.0 270 > th dose independent rect. 9 10
952 259.06 temperature 20.0 90 > th dose independent rect. 5 8
953 259.10 wind 9.0 1440 < th dose independent rect. 3 4
954 259.10 temperature 10.0 1440 > th dose independent rect. 3 4
957 259.10 temperature 30.0 1440 < th dose independent rect. 3 4
961 259.10 humidity 50.0 1440 > th dose independent rect. 3 4
966 259.10 atmosphere 995.0 1440 > th dose independent rect. 3 4
967 259.10 radiation 40.0 1440 < th dose independent rect. 3 4
971 259.10 temperature 10.0 1440 > th dose independent rect. 7 20
986 259.23 wind 9.0 270 < th dose independent rect. 3 22
990 259.27 precipitation 0.1 10 < th dose independent rect. 6 20
991 259.27 precipitation 0.1 10 < th dose dependent rect. 6 20