Os04g0565300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os04g0565300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 262.58 | 0.761 | 6.48 | 1.62 | 0.1 | -2.47 | 1.65 | 2.49 | 0.897 | 5.5 | 23.4 | 4282 | -- | -- |
| 265.68 | 0.759 | 6.51 | 1.14 | 0.134 | -2.37 | 1.49 | -- | 0.931 | 5.19 | 21.17 | 4282 | -- | -- |
| 269.09 | 0.764 | 6.48 | 1.64 | 0.101 | -2.44 | -- | 2.51 | 0.911 | 5.51 | 23.23 | 4342 | -- | -- |
| 271.78 | 0.768 | 6.55 | 0.996 | 0.0974 | -2.26 | -- | -- | 0.805 | 6.41 | 22.59 | 4357 | -- | -- |
| 269.56 | 0.765 | 6.48 | 1.64 | -- | -2.44 | -- | 2.48 | 0.905 | -- | 23.28 | 4364 | -- | -- |
| 422.49 | 0.964 | 6.63 | 0.09 | 0.00321 | -- | 1.56 | -- | 0.458 | 5.77 | -- | -- | -- | -- |
| 427.34 | 0.968 | 6.63 | 0.104 | 0.135 | -- | -- | -- | 0.453 | 11.4 | -- | -- | -- | -- |
| 272.29 | 0.769 | 6.56 | 0.99 | -- | -2.25 | -- | -- | 0.793 | -- | 22.69 | 4375 | -- | -- |
| 293.21 | 0.798 | 6.62 | -- | 0.0781 | -2.01 | -- | -- | 0.51 | 5.68 | 24.4 | 4403 | -- | -- |
| 428.48 | 0.967 | 6.63 | 0.1 | -- | -- | -- | -- | 0.452 | -- | -- | -- | -- | -- |
| 427.62 | 0.967 | 6.63 | -- | 0.134 | -- | -- | -- | 0.441 | 11.3 | -- | -- | -- | -- |
| 293.5 | 0.798 | 6.62 | -- | -- | -2.01 | -- | -- | 0.505 | -- | 24.45 | 4430 | -- | -- |
| 428.74 | 0.966 | 6.64 | -- | -- | -- | -- | -- | 0.441 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 260.94 | temperature | 25 | 4320 | < th | dose independent | rect. | 14 | 19 |
| 2 | 261.11 | temperature | 25 | 4320 | > th | dose independent | rect. | 14 | 19 |
| 5 | 261.65 | temperature | 25 | 4320 | > th | dose dependent | sin | 8 | NA |
| 13 | 262.43 | temperature | 25 | 4320 | > th | dose dependent | rect. | 18 | 18 |
| 17 | 262.68 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 16 |
| 22 | 262.76 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 16 |
| 55 | 263.38 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 11 |
| 59 | 263.41 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 20 |
| 68 | 263.62 | temperature | 25 | 4320 | < th | dose independent | sin | 7 | NA |
| 75 | 263.72 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 88 | 263.95 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 20 |
| 116 | 264.32 | temperature | 25 | 4320 | > th | dose independent | sin | 8 | NA |
| 130 | 264.45 | temperature | 25 | 4320 | < th | dose independent | sin | 13 | NA |
| 133 | 264.47 | temperature | 25 | 4320 | > th | dose independent | sin | 13 | NA |
| 176 | 265.00 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 22 |
| 184 | 265.06 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 185 | 265.07 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 284 | 265.51 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 294 | 265.57 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 16 |
| 504 | 266.42 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 512 | 266.46 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 534 | 266.57 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 566 | 266.69 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 581 | 266.76 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 592 | 266.81 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 18 |
| 634 | 266.95 | temperature | 25 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 640 | 266.96 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 21 |
| 691 | 267.15 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 20 |
| 720 | 267.24 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 17 |
| 739 | 267.30 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 5 |
| 762 | 267.36 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 15 |
| 783 | 267.41 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 787 | 267.42 | temperature | 10 | 4320 | > th | dose dependent | sin | 14 | NA |
| 802 | 267.46 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 869 | 267.65 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 4 |
| 876 | 267.66 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 880 | 267.66 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 11 |
| 937 | 267.80 | temperature | 10 | 4320 | > th | dose dependent | sin | 8 | NA |
| 958 | 267.83 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 23 |
| 987 | 267.88 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |