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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0565200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cis-zeatin O-glucosyltransferase 1 (EC 2.4.1.215) (cisZOG1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.74 (0.0527) R2 : 0.389
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.841 (0.129) R2dC : 0.0579 R2C : 0.0711
β3 : 3.15 (0.22) R2dE : 0.303 R2E : 0.33
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.12 (0.115) R2dN8 : 0.00206 R2N8 : 0.0143
σ : 0.977
deviance : 440.33
__
_____
C
peak time of C : 9.42
E
wheather : radiation
threshold : 26.37
memory length : 4975
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 7.09
open length of G : 0.988

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
428.72 0.973 5.67 -0.0657 0.924 1.79 -0.98 -3.83 -0.0103 10.1 19.03 4336 7.08 0.933
450.51 0.989 5.74 0.157 0.854 2.49 -1.17 -- -0.156 10.3 24.81 4280 7.08 0.933
431.45 0.967 5.67 -0.0788 0.915 2.03 -- -4.32 -0.0106 10 18.15 4346 7.1 0.943
441.73 0.979 5.72 0.409 0.702 2.97 -- -- -0.2 10 24.9 4981 7.07 0.967
458.93 0.998 5.71 -0.00164 -- 2.19 -- -4.21 -0.13 -- 17.53 4722 7 0.893
612.04 1.16 5.87 -0.848 0.931 -- -1.14 -- -0.708 9.82 -- -- -- --
616.87 1.16 5.87 -0.894 0.941 -- -- -- -0.712 9.62 -- -- -- --
474.11 1.01 5.7 0.617 -- 3.35 -- -- 0.0309 -- 25.19 4978 7.08 0.967
440.33 0.977 5.74 -- 0.841 3.15 -- -- -0.12 9.42 26.37 4975 7.09 0.988
669.31 1.21 5.9 -0.901 -- -- -- -- -0.71 -- -- -- -- --
637.91 1.18 5.85 -- 0.943 -- -- -- -0.612 9.69 -- -- -- --
481.56 1.02 5.76 -- -- 3.21 -- -- -0.0959 -- 26.05 4969 7.08 0.984
690.74 1.23 5.88 -- -- -- -- -- -0.61 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 435.39 radiation 20 4320 > th dose dependent rect. 7 1
16 440.79 radiation 20 4320 > th dose independent rect. 7 1
32 445.24 radiation 30 4320 < th dose independent rect. 7 1
34 448.39 atmosphere 995 43200 < th dose independent rect. 18 21
35 448.88 radiation 30 4320 < th dose independent rect. 2 7
36 449.02 radiation 30 4320 < th dose independent rect. 4 5
38 449.06 radiation 30 4320 < th dose independent rect. 17 16
40 449.14 radiation 30 4320 < th dose independent rect. 19 14
41 449.21 radiation 30 4320 < th dose independent rect. 6 3
43 449.31 radiation 30 4320 < th dose independent rect. 21 12
46 449.35 atmosphere 995 43200 < th dose independent rect. 21 18
55 449.69 atmosphere 995 43200 < th dose dependent rect. 11 16
58 449.99 atmosphere 995 43200 > th dose independent rect. 20 19
102 450.94 atmosphere 995 43200 > th dose independent sin 5 NA
105 451.06 atmosphere 995 43200 < th dose dependent rect. 13 20
106 451.16 atmosphere 995 43200 < th dose independent sin 5 NA
110 451.58 wind 9 43200 > th dose independent rect. 10 3
112 451.88 atmosphere 995 43200 < th dose dependent rect. 12 14
116 452.39 atmosphere 995 43200 < th dose dependent sin 17 NA
118 452.67 radiation 10 1440 < th dose independent rect. 11 20
122 453.49 wind 9 43200 < th dose independent rect. 20 19
126 453.97 wind 9 43200 > th dose independent rect. 20 19
128 454.03 wind 9 43200 < th dose independent rect. 15 22
130 454.30 temperature 20 1440 < th dose independent rect. 23 1
140 455.20 wind 9 43200 > th dose independent rect. 14 23
147 455.30 temperature 20 14400 > th dose independent rect. 20 5
150 455.36 wind 7 43200 > th dose dependent rect. 9 5
151 455.40 temperature 20 1440 < th dose independent rect. 22 3
153 455.52 wind 9 43200 < th dose independent rect. 10 3
154 455.56 radiation 10 1440 < th dose independent sin 18 NA
155 455.56 temperature 20 14400 > th dose independent rect. 21 3
160 455.68 wind 7 43200 > th dose dependent rect. 19 19
161 455.70 wind 7 43200 > th dose dependent rect. 17 21
172 456.04 temperature 20 14400 < th dose independent rect. 21 3
174 456.11 atmosphere 995 43200 > th dose independent rect. 17 21
176 456.18 wind 7 43200 > th dose dependent rect. 10 3
177 456.19 temperature 20 1440 > th dose independent rect. 23 1
182 456.38 temperature 20 1440 > th dose independent rect. 22 3
189 456.50 radiation 20 1440 < th dose independent rect. 11 22
202 456.63 wind 5 43200 < th dose independent rect. 18 13
207 456.79 wind 9 43200 > th dose independent rect. 17 22
211 456.82 wind 7 43200 > th dose independent rect. 17 20
214 456.88 temperature 20 1440 > th dose independent rect. 21 6
217 456.94 radiation 10 1440 < th dose independent rect. 11 7
224 457.11 temperature 20 1440 < th dose independent rect. 21 6
225 457.16 radiation 10 1440 < th dose independent rect. 11 9
226 457.16 radiation 10 1440 < th dose independent rect. 11 11
235 457.26 radiation 10 1440 < th dose independent rect. 11 16
240 457.31 wind 9 43200 < th dose independent rect. 4 11
241 457.32 temperature 20 1440 < th dose independent rect. 22 11
267 457.70 wind 7 43200 < th dose independent sin 11 NA
273 457.78 temperature 20 1440 > th dose independent rect. 21 12
280 457.88 wind 5 43200 > th dose independent rect. 18 13
306 458.34 wind 9 43200 < th dose independent rect. 1 14
308 458.36 radiation 20 1440 < th dose independent rect. 11 1
311 458.41 wind 9 43200 < th dose independent rect. 8 6
314 458.50 wind 9 43200 < th dose independent sin 3 NA
319 458.55 wind 7 43200 > th dose independent sin 11 NA
322 458.57 wind 9 43200 < th dose independent rect. 7 8
327 458.63 wind 9 43200 > th dose independent rect. 4 11
335 458.79 wind 5 43200 > th dose dependent sin 11 NA
371 459.11 radiation 20 1440 < th dose dependent rect. 11 1
375 459.17 wind 9 43200 < th dose independent rect. 3 23
377 459.21 wind 5 43200 > th dose dependent rect. 18 13
384 459.29 wind 9 43200 < th dose independent rect. 1 23
389 459.32 wind 9 43200 > th dose dependent rect. 10 21
390 459.33 wind 9 43200 < th dose independent no NA NA
417 459.43 wind 7 43200 > th dose dependent rect. 4 10
436 459.56 wind 9 43200 > th dose independent rect. 7 8
441 459.65 wind 9 43200 > th dose independent rect. 4 22
447 459.71 wind 9 43200 > th dose independent rect. 1 14
456 459.75 wind 9 43200 > th dose independent rect. 4 20
459 459.77 wind 9 43200 > th dose independent rect. 1 23
463 459.82 wind 9 43200 > th dose independent no NA NA
485 460.00 wind 9 43200 < th dose independent rect. 6 23
490 460.04 wind 9 43200 < th dose independent rect. 23 23
491 460.06 wind 7 43200 > th dose independent sin 5 NA
497 460.09 wind 7 43200 > th dose dependent rect. 1 14
508 460.21 wind 9 43200 > th dose independent sin 2 NA
511 460.23 radiation 10 1440 < th dose independent rect. 13 5
522 460.33 wind 9 43200 > th dose independent rect. 6 23
546 460.47 wind 9 43200 > th dose independent rect. 23 23
592 460.76 wind 9 43200 < th dose independent rect. 12 23
596 460.77 wind 9 43200 > th dose dependent rect. 10 8
613 460.85 radiation 20 1440 < th dose independent rect. 15 22
619 460.92 wind 7 43200 > th dose dependent sin 3 NA
631 460.99 wind 9 43200 > th dose independent rect. 12 23
657 461.18 wind 9 43200 > th dose independent rect. 1 17
662 461.21 wind 9 43200 < th dose dependent rect. 21 9
736 461.52 wind 9 43200 < th dose independent rect. 10 23
754 461.66 wind 1 43200 > th dose dependent rect. 21 9
764 461.71 temperature 20 1440 > th dose independent sin 10 NA
776 461.73 wind 9 43200 > th dose dependent rect. 10 16
784 461.78 wind 9 43200 > th dose independent rect. 10 23
793 461.80 wind 9 43200 > th dose dependent rect. 10 14
811 461.98 temperature 20 1440 < th dose independent sin 9 NA
854 462.27 temperature 20 1440 < th dose dependent rect. 3 2
878 462.43 wind 3 43200 > th dose dependent rect. 22 17
898 462.55 radiation 10 1440 < th dose dependent rect. 11 22