Os04g0560100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os04g0560100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 222.31 | 0.701 | 3.13 | 0.403 | 0.0599 | 0.771 | 0.321 | 1.78 | 0.24 | 19.9 | 1011 | 17247 | -- | -- |
| 234.68 | 0.713 | 3.05 | 1.1 | 0.0622 | 0.766 | 0.361 | -- | 0.395 | 20.4 | 1012 | 17204 | -- | -- |
| 222.59 | 0.695 | 3.13 | 0.393 | 0.0603 | 0.772 | -- | 1.78 | 0.24 | 19.6 | 1012 | 16912 | -- | -- |
| 235.01 | 0.714 | 3.05 | 1.1 | 0.0658 | 0.766 | -- | -- | 0.405 | 19 | 1012 | 16854 | -- | -- |
| 222.78 | 0.695 | 3.13 | 0.392 | -- | 0.771 | -- | 1.78 | 0.24 | -- | 1012 | 16912 | -- | -- |
| 262.14 | 0.759 | 3.1 | 0.709 | 0.0682 | -- | 0.361 | -- | 0.168 | 19.2 | -- | -- | -- | -- |
| 262.47 | 0.759 | 3.1 | 0.702 | 0.0714 | -- | -- | -- | 0.169 | 18.4 | -- | -- | -- | -- |
| 235.23 | 0.714 | 3.05 | 1.1 | -- | 0.768 | -- | -- | 0.405 | -- | 1012 | 16850 | -- | -- |
| 261.85 | 0.754 | 3.09 | -- | 0.0598 | 0.634 | -- | -- | 0.244 | 18.9 | 1009 | 16223 | -- | -- |
| 262.74 | 0.757 | 3.1 | 0.7 | -- | -- | -- | -- | 0.168 | -- | -- | -- | -- | -- |
| 275.46 | 0.776 | 3.12 | -- | 0.0628 | -- | -- | -- | 0.0912 | 19 | -- | -- | -- | -- |
| 262.03 | 0.754 | 3.08 | -- | -- | 0.642 | -- | -- | 0.245 | -- | 1009 | 16203 | -- | -- |
| 275.67 | 0.775 | 3.12 | -- | -- | -- | -- | -- | 0.0901 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 218.21 | wind | 1 | 14400 | < th | dose dependent | rect. | 21 | 15 |
| 10 | 218.61 | humidity | 50 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 11 | 218.64 | wind | 1 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 43 | 219.17 | humidity | 50 | 14400 | < th | dose dependent | rect. | 14 | 23 |
| 97 | 219.30 | humidity | 50 | 14400 | < th | dose dependent | sin | 21 | NA |
| 123 | 219.37 | humidity | 50 | 14400 | < th | dose dependent | no | NA | NA |
| 262 | 219.63 | wind | 1 | 14400 | < th | dose dependent | sin | 9 | NA |
| 345 | 220.20 | humidity | 50 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 346 | 220.21 | humidity | 50 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 376 | 220.41 | humidity | 50 | 14400 | < th | dose independent | rect. | 8 | 8 |
| 391 | 220.42 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 401 | 220.59 | humidity | 50 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 406 | 220.71 | humidity | 50 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 412 | 220.76 | humidity | 50 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 413 | 220.77 | humidity | 50 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 414 | 220.77 | humidity | 50 | 14400 | > th | dose independent | rect. | 2 | 14 |
| 417 | 220.78 | humidity | 50 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 420 | 220.79 | humidity | 50 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 427 | 220.81 | humidity | 50 | 14400 | > th | dose independent | rect. | 23 | 17 |
| 440 | 220.96 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 444 | 221.04 | wind | 1 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 447 | 221.08 | wind | 1 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 449 | 221.10 | humidity | 50 | 14400 | < th | dose independent | sin | 5 | NA |
| 469 | 221.17 | humidity | 50 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 505 | 221.25 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 8 |
| 508 | 221.29 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 515 | 221.35 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 521 | 221.43 | humidity | 50 | 14400 | > th | dose independent | sin | 5 | NA |
| 525 | 221.46 | humidity | 50 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 526 | 221.47 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 574 | 221.61 | wind | 3 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 577 | 221.67 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 603 | 221.75 | wind | 1 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 614 | 221.83 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 16 |
| 642 | 221.92 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 702 | 222.32 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 721 | 222.50 | humidity | 50 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 742 | 222.54 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 767 | 222.59 | humidity | 50 | 14400 | < th | dose independent | no | NA | NA |
| 917 | 222.97 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 931 | 223.14 | humidity | 50 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 932 | 223.14 | humidity | 50 | 14400 | > th | dose independent | rect. | 2 | 22 |
| 935 | 223.15 | humidity | 50 | 14400 | > th | dose independent | rect. | 4 | 17 |
| 937 | 223.15 | humidity | 50 | 14400 | > th | dose independent | rect. | 2 | 19 |
| 947 | 223.16 | humidity | 50 | 14400 | > th | dose independent | rect. | 6 | 17 |
| 954 | 223.17 | humidity | 50 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 979 | 223.18 | humidity | 50 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 980 | 223.19 | humidity | 50 | 14400 | > th | dose independent | no | NA | NA |
| 993 | 223.19 | humidity | 50 | 14400 | > th | dose independent | rect. | 6 | 21 |
| 996 | 223.19 | humidity | 50 | 14400 | > th | dose independent | rect. | 23 | 22 |
| 999 | 223.19 | humidity | 50 | 14400 | > th | dose independent | rect. | 8 | 23 |