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Os04g0559700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Plasma membrane intrinsic protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.9 (0.0226) R2 : 0.696
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.67 (0.057) R2dC : 0.576 R2C : 0.543
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.631 (0.0474) R2dN8 : 0.153 R2N8 : 0.12
σ : 0.425
deviance : 82.49
__
_____
C
peak time of C : 8.41
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
63.18 0.373 14.9 0.677 1.66 -7.01 1.14 21.6 0.653 8.49 0.06743 266 -- --
70.14 0.393 14.9 0.434 1.67 -0.68 1.38 -- 0.682 8.44 0.06743 266 -- --
67.23 0.382 14.9 0.727 1.66 -7.42 -- 22.4 0.648 8.47 6.188e-06 265 -- --
70.7 0.392 14.9 0.527 1.63 -0.946 -- -- 0.687 8.45 0.9565 297 -- --
212.96 0.68 14.9 0.879 -- -7.94 -- 22.6 0.675 -- 0.7069 296 -- --
70.64 0.394 14.9 0.425 1.67 -- 1.38 -- 0.684 8.46 -- -- -- --
76.74 0.41 14.9 0.467 1.67 -- -- -- 0.683 8.43 -- -- -- --
214.65 0.682 15 0.577 -- -1.96 -- -- 0.643 -- 1.927 298 -- --
77.73 0.411 14.9 -- 1.63 -1.28 -- -- 0.618 8.43 1.316 271 -- --
231.77 0.711 15 0.476 -- -- -- -- 0.7 -- -- -- -- --
82.49 0.425 14.9 -- 1.67 -- -- -- 0.631 8.41 -- -- -- --
221.51 0.693 15 -- -- -1.89 -- -- 0.612 -- 1.187 297 -- --
237.74 0.72 15 -- -- -- -- -- 0.647 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 57.95 humidity 90.0 30 < th dose independent rect. 20 20
8 59.32 radiation 10.0 10 < th dose independent rect. 14 6
11 59.37 precipitation 0.1 270 < th dose independent rect. 17 22
12 59.37 precipitation 0.1 270 < th dose dependent rect. 17 22
24 59.73 wind 1.0 270 > th dose independent rect. 18 8
25 59.88 temperature 15.0 270 > th dose independent rect. 6 8
26 59.90 wind 9.0 270 < th dose independent rect. 14 16
34 60.03 radiation 1.0 30 > th dose independent rect. 9 7
35 60.07 precipitation 0.1 270 < th dose independent rect. 6 8
36 60.07 precipitation 0.1 270 < th dose dependent rect. 6 8
37 60.09 radiation 40.0 10 < th dose dependent rect. 16 17
42 60.19 atmosphere 995.0 270 > th dose independent rect. 6 8
43 60.19 atmosphere 1015.0 270 < th dose independent rect. 6 8
45 60.19 temperature 10.0 270 > th dose independent rect. 14 16
46 60.21 humidity 90.0 10 < th dose independent rect. 9 7
53 60.28 humidity 90.0 90 < th dose independent rect. 20 6
54 60.33 wind 9.0 270 < th dose independent rect. 14 4
56 60.34 temperature 15.0 270 > th dose independent rect. 18 20
58 60.37 humidity 50.0 10 > th dose independent rect. 16 17
60 60.38 wind 9.0 10 < th dose independent rect. 16 4
61 60.38 wind 9.0 270 < th dose independent rect. 6 8
62 60.38 precipitation 0.1 10 < th dose independent rect. 20 20
63 60.38 precipitation 0.1 10 < th dose dependent rect. 20 20
65 60.39 wind 9.0 30 < th dose dependent rect. 16 17
66 60.41 wind 9.0 270 < th dose independent rect. 2 16
67 60.41 wind 9.0 10 < th dose independent rect. 16 17
68 60.43 humidity 50.0 10 > th dose independent rect. 16 4
71 60.44 temperature 10.0 1440 > th dose independent rect. 10 7
74 60.44 radiation 1.0 270 > th dose independent rect. 6 8
75 60.44 temperature 10.0 1440 > th dose independent rect. 17 17
80 60.50 atmosphere 995.0 10 > th dose independent rect. 20 20
84 60.52 humidity 50.0 30 > th dose independent rect. 14 6
85 60.52 radiation 20.0 10 < th dose dependent rect. 13 7
88 60.54 wind 1.0 270 > th dose independent rect. 13 5
90 60.54 temperature 15.0 10 > th dose independent rect. 20 20
91 60.55 temperature 10.0 270 > th dose dependent rect. 18 7
93 60.57 temperature 10.0 10 > th dose independent rect. 16 4
95 60.57 atmosphere 1010.0 10 < th dose independent rect. 16 4
97 60.57 radiation 40.0 10 < th dose independent rect. 16 4
99 60.57 atmosphere 1015.0 10 < th dose independent rect. 20 20
101 60.57 radiation 20.0 10 < th dose dependent rect. 5 15
102 60.58 temperature 10.0 270 > th dose independent rect. 14 4
104 60.58 atmosphere 1010.0 270 < th dose independent rect. 14 4
108 60.60 wind 1.0 10 > th dose independent rect. 16 4
110 60.61 radiation 40.0 10 < th dose dependent rect. 14 6
117 60.64 humidity 90.0 270 < th dose independent rect. 18 7
118 60.65 temperature 10.0 10 > th dose independent rect. 9 7
120 60.65 atmosphere 1015.0 10 < th dose independent rect. 9 7
121 60.65 precipitation 0.1 10 < th dose independent rect. 9 7
122 60.65 temperature 10.0 10 > th dose independent rect. 16 17
123 60.65 precipitation 0.1 10 < th dose dependent rect. 9 7
124 60.66 radiation 40.0 10 < th dose independent rect. 16 17
125 60.66 atmosphere 995.0 270 > th dose independent rect. 18 20
127 60.67 precipitation 0.1 10 < th dose independent rect. 16 4
128 60.67 atmosphere 995.0 10 > th dose independent rect. 9 7
130 60.67 precipitation 0.1 10 < th dose dependent rect. 16 4
132 60.68 temperature 10.0 1440 > th dose independent rect. 17 4
136 60.68 radiation 30.0 1440 < th dose independent rect. 17 4
148 60.68 temperature 10.0 1440 > th dose independent rect. 21 20
153 60.69 atmosphere 1015.0 270 < th dose dependent rect. 15 2
157 60.70 wind 9.0 10 < th dose independent rect. 20 20
159 60.70 radiation 40.0 10 < th dose dependent rect. 16 4
166 60.73 radiation 10.0 270 < th dose independent rect. 18 8
175 60.76 humidity 60.0 270 > th dose independent rect. 18 8
176 60.76 wind 9.0 270 < th dose independent rect. 18 20
178 60.76 radiation 10.0 270 < th dose dependent rect. 18 8
179 60.77 temperature 10.0 270 > th dose independent rect. 18 8
184 60.77 temperature 10.0 270 > th dose independent rect. 2 16
185 60.77 atmosphere 1015.0 270 < th dose independent rect. 2 16
186 60.77 atmosphere 1015.0 270 < th dose dependent rect. 14 4
190 60.78 wind 9.0 270 < th dose independent rect. 15 2
192 60.79 wind 9.0 10 < th dose independent rect. 9 7
198 60.81 wind 9.0 270 < th dose independent rect. 18 8
200 60.81 atmosphere 1015.0 270 < th dose independent rect. 18 20
213 60.88 atmosphere 995.0 270 > th dose independent rect. 18 8
215 60.88 wind 1.0 30 > th dose dependent rect. 20 7
225 60.91 temperature 30.0 270 < th dose independent rect. 18 8
226 60.91 radiation 10.0 10 < th dose independent rect. 5 15
229 60.93 humidity 90.0 90 < th dose independent rect. 9 17
231 60.95 radiation 30.0 270 < th dose independent rect. 15 2
234 60.96 precipitation 0.1 270 < th dose independent rect. 18 8
235 60.96 precipitation 0.1 270 < th dose dependent rect. 18 8
236 60.97 radiation 40.0 270 < th dose independent rect. 14 16
244 60.98 atmosphere 1015.0 270 < th dose independent rect. 19 18
254 61.00 temperature 10.0 10 > th dose dependent rect. 20 20
256 61.01 temperature 10.0 270 > th dose independent rect. 15 2
258 61.01 atmosphere 1010.0 270 < th dose independent rect. 15 2
295 61.12 wind 7.0 30 < th dose independent rect. 14 6
297 61.12 atmosphere 1015.0 10 < th dose dependent rect. 16 4
298 61.13 atmosphere 1015.0 270 < th dose independent rect. 18 7
301 61.14 radiation 40.0 270 < th dose independent rect. 14 4
316 61.17 humidity 90.0 270 < th dose independent rect. 20 4
336 61.20 humidity 60.0 14400 > th dose independent rect. 21 7
361 61.25 atmosphere 995.0 10 > th dose independent rect. 16 4
365 61.25 radiation 10.0 10 < th dose independent rect. 8 12
367 61.25 precipitation 0.1 10 < th dose independent rect. 20 18
370 61.25 precipitation 0.1 10 < th dose dependent rect. 20 18
401 61.31 precipitation 0.1 270 < th dose independent rect. 14 3
404 61.31 precipitation 0.1 270 < th dose dependent rect. 14 3
422 61.35 wind 1.0 10 > th dose independent rect. 14 6
425 61.35 atmosphere 1015.0 30 < th dose independent rect. 20 18
450 61.38 temperature 10.0 1440 > th dose independent rect. 15 6
457 61.38 temperature 10.0 1440 > th dose independent rect. 21 18
461 61.38 wind 1.0 270 > th dose dependent rect. 20 3
470 61.39 temperature 10.0 30 > th dose independent rect. 14 6
472 61.39 atmosphere 1010.0 30 < th dose independent rect. 14 6
475 61.39 atmosphere 995.0 30 > th dose independent rect. 16 17
478 61.39 atmosphere 995.0 30 > th dose independent rect. 20 18
486 61.41 humidity 90.0 30 < th dose dependent rect. 20 20
496 61.43 wind 1.0 270 > th dose independent rect. 18 19
516 61.47 precipitation 0.1 270 > th dose independent rect. 15 13
520 61.47 humidity 90.0 270 < th dose dependent rect. 20 4
526 61.48 wind 9.0 30 < th dose independent rect. 20 18
539 61.51 precipitation 0.1 270 > th dose independent rect. 17 11
569 61.57 radiation 10.0 10 < th dose independent rect. 3 17
573 61.58 precipitation 0.1 270 < th dose independent rect. 8 15
576 61.58 precipitation 0.1 270 < th dose dependent rect. 8 15
578 61.59 humidity 90.0 270 < th dose independent rect. 16 1
588 61.59 precipitation 0.1 270 > th dose independent rect. 10 18
589 61.59 radiation 10.0 10 < th dose independent rect. 1 19
595 61.60 wind 9.0 30 < th dose dependent rect. 16 4
626 61.67 precipitation 0.1 10 < th dose independent rect. 14 6
630 61.67 wind 9.0 270 < th dose dependent rect. 16 1
631 61.67 precipitation 0.1 10 < th dose dependent rect. 14 6
638 61.69 humidity 50.0 270 > th dose independent rect. 14 4
681 61.75 radiation 10.0 10 > th dose independent rect. 9 22
712 61.80 radiation 40.0 1440 < th dose dependent rect. 21 8
713 61.81 atmosphere 995.0 270 > th dose independent rect. 14 4
732 61.81 humidity 50.0 10 > th dose dependent rect. 16 17
735 61.82 atmosphere 995.0 270 > th dose independent rect. 14 16
751 61.83 radiation 20.0 10 < th dose dependent rect. 8 12
753 61.83 temperature 10.0 30 > th dose dependent rect. 20 18
759 61.84 temperature 15.0 270 > th dose independent rect. 8 15
767 61.85 radiation 10.0 10 < th dose dependent sin 23 NA
790 61.88 wind 9.0 270 < th dose dependent rect. 14 4
796 61.89 precipitation 0.1 30 < th dose independent rect. 16 17
797 61.89 precipitation 0.1 30 < th dose dependent rect. 16 17
803 61.91 humidity 50.0 30 > th dose independent rect. 14 19
837 61.96 wind 9.0 270 < th dose dependent rect. 14 16
842 61.97 radiation 20.0 10 < th dose dependent rect. 3 17
843 61.98 radiation 1.0 270 > th dose independent rect. 15 2
881 62.02 precipitation 0.1 270 < th dose independent rect. 14 16
882 62.02 humidity 50.0 270 > th dose dependent rect. 23 9
883 62.02 precipitation 0.1 270 < th dose dependent rect. 14 16
896 62.05 radiation 10.0 10 < th dose independent sin 22 NA
911 62.07 radiation 40.0 270 < th dose dependent rect. 16 1
917 62.08 atmosphere 1015.0 270 < th dose independent rect. 8 15
938 62.11 humidity 50.0 270 > th dose independent rect. 18 19
947 62.13 wind 3.0 270 > th dose independent rect. 20 3
954 62.13 radiation 20.0 10 < th dose dependent rect. 1 19
957 62.14 humidity 70.0 270 > th dose independent rect. 23 9
981 62.18 radiation 30.0 270 < th dose independent rect. 23 9
996 62.19 humidity 50.0 270 > th dose independent rect. 19 17
998 62.19 temperature 10.0 270 > th dose dependent rect. 14 4