Os04g0559100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF315 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0559100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF315 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 250.74 | 0.744 | 7.92 | -3.69 | 1.19 | 3.56 | 1.73 | -11 | -0.25 | 2.02 | 24.69 | 1054 | -- | -- |
| 291.53 | 0.795 | 7.65 | -1.25 | 1.36 | 2.62 | 1.41 | -- | 0.257 | 2.21 | 23.79 | 974 | -- | -- |
| 260.35 | 0.751 | 7.9 | -3.63 | 1.23 | 3.51 | -- | -10.9 | -0.121 | 1.86 | 25.39 | 1070 | -- | -- |
| 292.57 | 0.797 | 7.65 | -1.31 | 1.24 | 2.48 | -- | -- | 0.266 | 1.46 | 23.65 | 1066 | -- | -- |
| 339.32 | 0.858 | 7.91 | -3.71 | -- | 3.96 | -- | -10.1 | -0.306 | -- | 24.4 | 1064 | -- | -- |
| 463.89 | 1.01 | 7.57 | -0.523 | 1.78 | -- | 1.19 | -- | 0.659 | 1 | -- | -- | -- | -- |
| 469.76 | 1.01 | 7.57 | -0.565 | 1.78 | -- | -- | -- | 0.654 | 0.934 | -- | -- | -- | -- |
| 378.25 | 0.906 | 7.64 | -1.39 | -- | 3.02 | -- | -- | 0.252 | -- | 23.9 | 1050 | -- | -- |
| 332.16 | 0.849 | 7.58 | -- | 1.3 | 2.18 | -- | -- | 0.569 | 1.5 | 24.92 | 1053 | -- | -- |
| 666.49 | 1.21 | 7.54 | -0.499 | -- | -- | -- | -- | 0.688 | -- | -- | -- | -- | -- |
| 478.18 | 1.02 | 7.56 | -- | 1.77 | -- | -- | -- | 0.717 | 0.92 | -- | -- | -- | -- |
| 425.16 | 0.96 | 7.59 | -- | -- | 2.72 | -- | -- | 0.46 | -- | 24.15 | 1046 | -- | -- |
| 673.06 | 1.21 | 7.53 | -- | -- | -- | -- | -- | 0.743 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 253.27 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 2 | 253.60 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 5 | 257.02 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 4 |
| 7 | 257.64 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 12 | 260.05 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 13 | 260.80 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 14 | 260.88 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 5 |
| 22 | 262.66 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 30 | 263.64 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 59 | 266.96 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 64 | 267.57 | radiation | 1 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 65 | 267.64 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 75 | 268.50 | temperature | 25 | 720 | > th | dose dependent | sin | 16 | NA |
| 112 | 269.88 | wind | 5 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 151 | 271.09 | temperature | 25 | 720 | > th | dose dependent | rect. | 14 | 9 |
| 155 | 271.15 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 16 |
| 163 | 271.29 | temperature | 25 | 1440 | > th | dose dependent | rect. | 4 | 19 |
| 199 | 271.84 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 22 |
| 215 | 272.00 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 222 | 272.16 | wind | 7 | 43200 | < th | dose independent | sin | 0 | NA |
| 235 | 272.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 269 | 272.76 | wind | 7 | 43200 | > th | dose independent | sin | 0 | NA |
| 278 | 272.85 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 295 | 272.98 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 341 | 273.71 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 344 | 273.75 | temperature | 25 | 720 | > th | dose dependent | sin | 10 | NA |
| 364 | 274.03 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 365 | 274.05 | temperature | 25 | 720 | > th | dose dependent | rect. | 14 | 15 |
| 380 | 274.18 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 381 | 274.19 | temperature | 25 | 1440 | > th | dose dependent | sin | 23 | NA |
| 436 | 275.08 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 445 | 275.18 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 545 | 276.67 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 550 | 276.69 | radiation | 30 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 554 | 276.72 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 565 | 276.80 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 571 | 276.84 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 575 | 276.85 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 11 |
| 611 | 277.35 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 614 | 277.38 | radiation | 20 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 674 | 278.12 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 805 | 279.67 | wind | 5 | 43200 | > th | dose dependent | sin | 23 | NA |
| 830 | 280.00 | radiation | 10 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 866 | 280.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 876 | 280.47 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 892 | 280.58 | humidity | 90 | 43200 | > th | dose dependent | sin | 15 | NA |
| 991 | 281.35 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 8 |