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Os04g0556600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
Description : Similar to Cis-zeatin O-glucosyltransferase 1 (EC 2.4.1.215) (cisZOG1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
158.88 | 0.592 | 10.4 | -1.47 | 1.58 | 1.32 | -1.54 | 2.96 | 0.036 | 7.17 | 1.052 | 14420 | -- | -- |
173.37 | 0.613 | 10.4 | -1.81 | 1.7 | 0.742 | -1.69 | -- | -0.014 | 7.03 | 20.17 | 19371 | -- | -- |
158.81 | 0.587 | 10.4 | -1.46 | 1.65 | 1.28 | -- | 3.14 | 0.0391 | 7.33 | 1.15 | 19816 | -- | -- |
166.07 | 0.6 | 10.5 | -1.98 | 1.92 | 1.44 | -- | -- | -0.0825 | 6.94 | 2.5 | 29527 | -- | -- |
295.01 | 0.8 | 10.4 | -2.35 | -- | 1.28 | -- | 1.98 | -0.066 | -- | 1.2 | 47520 | -- | -- |
193.1 | 0.651 | 10.4 | -1.83 | 1.6 | -- | -1.48 | -- | 0.176 | 7.09 | -- | -- | -- | -- |
198.89 | 0.66 | 10.4 | -1.86 | 1.6 | -- | -- | -- | 0.179 | 7.07 | -- | -- | -- | -- |
289.99 | 0.793 | 10.6 | -3.17 | -- | 1.59 | -- | -- | -0.54 | -- | 1.643 | 47520 | -- | -- |
240.79 | 0.723 | 10.4 | -- | 1.65 | 1.39 | -- | -- | 0.0404 | 7.2 | 46.17 | 28077 | -- | -- |
332.94 | 0.853 | 10.4 | -1.82 | -- | -- | -- | -- | 0.208 | -- | -- | -- | -- | -- |
289.65 | 0.796 | 10.4 | -- | 1.58 | -- | -- | -- | 0.386 | 7.14 | -- | -- | -- | -- |
369.67 | 0.895 | 10.4 | -- | -- | 1.4 | -- | -- | 0.386 | -- | 49.31 | 30295 | -- | -- |
420.74 | 0.957 | 10.4 | -- | -- | -- | -- | -- | 0.41 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance![]() |
Histogram![]() ![]() |
Local optima within top1000 grid-points
rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|
1 | 148.52 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 12 |
4 | 148.69 | humidity | 80 | 43200 | > th | dose independent | sin | 18 | NA |
7 | 148.76 | humidity | 80 | 43200 | > th | dose independent | rect. | 8 | 17 |
25 | 149.08 | humidity | 80 | 43200 | < th | dose independent | rect. | 12 | 12 |
31 | 149.12 | humidity | 80 | 43200 | > th | dose independent | rect. | 5 | 18 |
33 | 149.13 | humidity | 80 | 43200 | < th | dose independent | sin | 18 | NA |
35 | 149.13 | humidity | 80 | 43200 | < th | dose independent | rect. | 8 | 16 |
64 | 149.36 | humidity | 80 | 43200 | < th | dose independent | rect. | 4 | 18 |
68 | 149.38 | humidity | 80 | 43200 | < th | dose independent | rect. | 2 | 19 |
76 | 149.43 | humidity | 80 | 43200 | > th | dose dependent | rect. | 21 | 2 |
99 | 149.57 | humidity | 60 | 43200 | > th | dose dependent | rect. | 14 | 1 |
103 | 149.59 | humidity | 60 | 43200 | > th | dose dependent | rect. | 12 | 3 |
107 | 149.60 | humidity | 70 | 43200 | > th | dose dependent | rect. | 12 | 12 |
129 | 149.71 | humidity | 70 | 43200 | > th | dose dependent | rect. | 3 | 20 |
158 | 149.83 | humidity | 70 | 43200 | > th | dose dependent | sin | 18 | NA |
177 | 149.90 | humidity | 70 | 43200 | > th | dose independent | rect. | 13 | 1 |
185 | 149.91 | humidity | 70 | 43200 | > th | dose dependent | rect. | 18 | 5 |
212 | 149.98 | humidity | 70 | 43200 | > th | dose independent | rect. | 13 | 3 |
336 | 150.33 | radiation | 1 | 43200 | > th | dose independent | rect. | 5 | 1 |
337 | 150.33 | radiation | 1 | 43200 | < th | dose independent | rect. | 5 | 1 |
376 | 150.42 | humidity | 70 | 43200 | > th | dose dependent | rect. | 4 | 12 |
384 | 150.43 | humidity | 70 | 43200 | > th | dose dependent | rect. | 3 | 14 |
404 | 150.46 | humidity | 70 | 43200 | > th | dose dependent | no | NA | NA |
415 | 150.49 | humidity | 70 | 43200 | > th | dose dependent | rect. | 12 | 23 |
446 | 150.55 | humidity | 70 | 43200 | > th | dose dependent | rect. | 18 | 23 |
467 | 150.63 | radiation | 1 | 43200 | < th | dose independent | rect. | 1 | 5 |
472 | 150.63 | humidity | 70 | 43200 | > th | dose dependent | rect. | 20 | 23 |
503 | 150.69 | radiation | 1 | 43200 | < th | dose independent | rect. | 19 | 11 |
531 | 150.72 | temperature | 25 | 43200 | > th | dose dependent | rect. | 20 | 1 |
675 | 150.94 | radiation | 1 | 43200 | < th | dose independent | rect. | 19 | 13 |
777 | 151.06 | radiation | 1 | 43200 | > th | dose independent | sin | 7 | NA |
778 | 151.06 | radiation | 1 | 43200 | < th | dose independent | sin | 8 | NA |
790 | 151.07 | temperature | 30 | 43200 | < th | dose dependent | rect. | 6 | 1 |
795 | 151.08 | temperature | 10 | 43200 | > th | dose dependent | rect. | 6 | 1 |
830 | 151.12 | humidity | 90 | 43200 | < th | dose dependent | rect. | 14 | 1 |
842 | 151.13 | humidity | 90 | 43200 | < th | dose dependent | rect. | 12 | 11 |
878 | 151.17 | temperature | 25 | 43200 | > th | dose independent | rect. | 6 | 1 |
887 | 151.18 | temperature | 25 | 43200 | < th | dose independent | rect. | 5 | 2 |