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Os04g0556600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cis-zeatin O-glucosyltransferase 1 (EC 2.4.1.215) (cisZOG1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0336) R2 : 0.618
β1 : -1.98 (0.123) R2dD : 0.291 R2D : 0.225
β2 : 1.92 (0.0862) R2dC : 0.397 R2C : 0.287
β3 : 1.44 (0.14) R2dE : 0.102 R2E : -0.0634
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0825 (0.0829) R2dN8 : 0.00939 R2N8 : -0.0138
σ : 0.6
deviance : 166.07
__
_____
C
peak time of C : 6.94
E
wheather : radiation
threshold : 2.5
memory length : 29527
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
158.88 0.592 10.4 -1.47 1.58 1.32 -1.54 2.96 0.036 7.17 1.052 14420 -- --
173.37 0.613 10.4 -1.81 1.7 0.742 -1.69 -- -0.014 7.03 20.17 19371 -- --
158.81 0.587 10.4 -1.46 1.65 1.28 -- 3.14 0.0391 7.33 1.15 19816 -- --
166.07 0.6 10.5 -1.98 1.92 1.44 -- -- -0.0825 6.94 2.5 29527 -- --
295.01 0.8 10.4 -2.35 -- 1.28 -- 1.98 -0.066 -- 1.2 47520 -- --
193.1 0.651 10.4 -1.83 1.6 -- -1.48 -- 0.176 7.09 -- -- -- --
198.89 0.66 10.4 -1.86 1.6 -- -- -- 0.179 7.07 -- -- -- --
289.99 0.793 10.6 -3.17 -- 1.59 -- -- -0.54 -- 1.643 47520 -- --
240.79 0.723 10.4 -- 1.65 1.39 -- -- 0.0404 7.2 46.17 28077 -- --
332.94 0.853 10.4 -1.82 -- -- -- -- 0.208 -- -- -- -- --
289.65 0.796 10.4 -- 1.58 -- -- -- 0.386 7.14 -- -- -- --
369.67 0.895 10.4 -- -- 1.4 -- -- 0.386 -- 49.31 30295 -- --
420.74 0.957 10.4 -- -- -- -- -- 0.41 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 148.52 humidity 80 43200 > th dose independent rect. 12 12
4 148.69 humidity 80 43200 > th dose independent sin 18 NA
7 148.76 humidity 80 43200 > th dose independent rect. 8 17
25 149.08 humidity 80 43200 < th dose independent rect. 12 12
31 149.12 humidity 80 43200 > th dose independent rect. 5 18
33 149.13 humidity 80 43200 < th dose independent sin 18 NA
35 149.13 humidity 80 43200 < th dose independent rect. 8 16
64 149.36 humidity 80 43200 < th dose independent rect. 4 18
68 149.38 humidity 80 43200 < th dose independent rect. 2 19
76 149.43 humidity 80 43200 > th dose dependent rect. 21 2
99 149.57 humidity 60 43200 > th dose dependent rect. 14 1
103 149.59 humidity 60 43200 > th dose dependent rect. 12 3
107 149.60 humidity 70 43200 > th dose dependent rect. 12 12
129 149.71 humidity 70 43200 > th dose dependent rect. 3 20
158 149.83 humidity 70 43200 > th dose dependent sin 18 NA
177 149.90 humidity 70 43200 > th dose independent rect. 13 1
185 149.91 humidity 70 43200 > th dose dependent rect. 18 5
212 149.98 humidity 70 43200 > th dose independent rect. 13 3
336 150.33 radiation 1 43200 > th dose independent rect. 5 1
337 150.33 radiation 1 43200 < th dose independent rect. 5 1
376 150.42 humidity 70 43200 > th dose dependent rect. 4 12
384 150.43 humidity 70 43200 > th dose dependent rect. 3 14
404 150.46 humidity 70 43200 > th dose dependent no NA NA
415 150.49 humidity 70 43200 > th dose dependent rect. 12 23
446 150.55 humidity 70 43200 > th dose dependent rect. 18 23
467 150.63 radiation 1 43200 < th dose independent rect. 1 5
472 150.63 humidity 70 43200 > th dose dependent rect. 20 23
503 150.69 radiation 1 43200 < th dose independent rect. 19 11
531 150.72 temperature 25 43200 > th dose dependent rect. 20 1
675 150.94 radiation 1 43200 < th dose independent rect. 19 13
777 151.06 radiation 1 43200 > th dose independent sin 7 NA
778 151.06 radiation 1 43200 < th dose independent sin 8 NA
790 151.07 temperature 30 43200 < th dose dependent rect. 6 1
795 151.08 temperature 10 43200 > th dose dependent rect. 6 1
830 151.12 humidity 90 43200 < th dose dependent rect. 14 1
842 151.13 humidity 90 43200 < th dose dependent rect. 12 11
878 151.17 temperature 25 43200 > th dose independent rect. 6 1
887 151.18 temperature 25 43200 < th dose independent rect. 5 2