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Os04g0544900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Alg9-like mannosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.83 (0.0189) R2 : 0.146
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.352 (0.0398) R2dN8 : 0.188 R2N8 : 0.146
σ : 0.356
deviance : 58.3
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.59 0.276 8.85 0.0171 0.284 0.568 -0.344 1.3 0.351 23.7 29.3 1764 -- --
34.94 0.275 8.83 0.308 0.286 0.705 -0.348 -- 0.363 23.8 29.56 1762 -- --
35.08 0.276 8.85 0.0194 0.29 0.573 -- 1.38 0.349 23.7 29.27 1799 -- --
35.47 0.277 8.83 0.327 0.285 0.712 -- -- 0.366 23.8 29.54 1762 -- --
40.17 0.295 8.84 0.0747 -- 0.566 -- 1.12 0.364 -- 29.3 1740 -- --
52.64 0.34 8.83 0.12 0.267 -- -0.375 -- 0.361 0.49 -- -- -- --
53.22 0.342 8.83 0.134 0.27 -- -- -- 0.363 0.816 -- -- -- --
40.53 0.297 8.82 0.331 -- 0.694 -- -- 0.367 -- 29.5 1748 -- --
38.15 0.288 8.84 -- 0.286 0.648 -- -- 0.332 24 29.55 1762 -- --
57.76 0.355 8.82 0.144 -- -- -- -- 0.368 -- -- -- -- --
53.69 0.343 8.83 -- 0.272 -- -- -- 0.348 0.839 -- -- -- --
43.22 0.306 8.82 -- -- 0.617 -- -- 0.374 -- 29.4 1721 -- --
58.3 0.356 8.83 -- -- -- -- -- 0.352 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.16 precipitation 0.1 43200 > th dose dependent rect. 17 4
3 35.77 precipitation 0.1 14400 < th dose independent rect. 17 9
4 35.77 precipitation 0.1 14400 < th dose dependent rect. 17 9
5 35.78 precipitation 0.1 14400 > th dose independent rect. 17 9
13 35.97 temperature 25.0 720 > th dose dependent rect. 19 16
23 36.24 precipitation 0.1 14400 > th dose dependent rect. 20 22
24 36.32 humidity 90.0 14400 < th dose dependent rect. 18 1
27 36.33 precipitation 0.1 43200 > th dose dependent rect. 19 2
28 36.34 humidity 50.0 14400 > th dose dependent rect. 18 1
32 36.41 precipitation 0.1 14400 > th dose dependent rect. 17 14
33 36.42 temperature 25.0 1440 > th dose dependent rect. 8 1
39 36.47 temperature 30.0 1440 < th dose independent rect. 14 3
40 36.47 temperature 30.0 1440 < th dose independent rect. 4 12
44 36.47 temperature 30.0 1440 < th dose independent rect. 22 18
48 36.47 precipitation 0.1 14400 > th dose dependent rect. 17 21
49 36.48 temperature 30.0 1440 < th dose independent rect. 10 6
57 36.49 temperature 30.0 1440 > th dose independent rect. 14 3
60 36.50 temperature 25.0 720 > th dose dependent sin 8 NA
69 36.53 temperature 25.0 1440 > th dose dependent rect. 2 8
78 36.58 temperature 25.0 4320 > th dose independent rect. 7 1
88 36.58 temperature 25.0 1440 > th dose dependent rect. 7 3
101 36.62 temperature 25.0 4320 < th dose independent rect. 7 1
106 36.65 precipitation 0.1 14400 > th dose dependent rect. 17 10
113 36.67 precipitation 0.1 14400 < th dose independent sin 16 NA
115 36.67 precipitation 0.1 14400 < th dose dependent sin 16 NA
117 36.68 precipitation 0.1 14400 > th dose independent sin 16 NA
119 36.68 temperature 30.0 1440 > th dose independent rect. 8 8
138 36.69 precipitation 0.1 14400 > th dose independent rect. 10 17
149 36.70 precipitation 0.1 14400 < th dose independent rect. 10 17
151 36.70 precipitation 0.1 14400 < th dose dependent rect. 10 17
155 36.71 precipitation 0.1 14400 > th dose independent rect. 8 19
156 36.71 precipitation 0.1 14400 < th dose independent rect. 8 19
158 36.71 precipitation 0.1 14400 < th dose dependent rect. 8 19
165 36.72 precipitation 0.1 14400 > th dose dependent rect. 4 23
186 36.74 precipitation 0.1 14400 > th dose dependent sin 14 NA
261 36.80 precipitation 0.1 14400 > th dose independent rect. 6 21
265 36.80 precipitation 0.1 14400 > th dose dependent rect. 8 19
266 36.81 temperature 30.0 1440 < th dose independent sin 3 NA
271 36.81 precipitation 0.1 14400 < th dose independent rect. 6 21
272 36.81 precipitation 0.1 14400 < th dose dependent rect. 6 21
291 36.83 precipitation 0.1 14400 > th dose dependent rect. 10 17
295 36.84 humidity 80.0 14400 > th dose independent rect. 17 1
348 36.87 precipitation 0.1 14400 > th dose dependent rect. 13 18
353 36.88 precipitation 0.1 14400 < th dose independent rect. 17 14
356 36.88 precipitation 0.1 14400 > th dose dependent rect. 13 14
357 36.88 precipitation 0.1 14400 < th dose dependent rect. 17 14
365 36.89 precipitation 0.1 14400 > th dose independent rect. 17 14
381 36.90 precipitation 0.1 14400 > th dose dependent rect. 13 20
454 36.95 temperature 30.0 14400 < th dose independent rect. 15 1
455 36.95 humidity 80.0 14400 < th dose independent rect. 17 1
466 36.95 precipitation 0.1 14400 > th dose dependent rect. 10 21
484 36.96 precipitation 0.1 14400 > th dose dependent rect. 8 23
494 36.98 temperature 30.0 1440 > th dose independent sin 3 NA
514 37.00 temperature 30.0 14400 > th dose independent rect. 15 1
523 37.00 precipitation 0.1 14400 > th dose dependent no NA NA
531 37.00 precipitation 0.1 14400 > th dose dependent rect. 24 23
535 37.01 precipitation 0.1 14400 > th dose independent rect. 17 16
596 37.06 precipitation 0.1 14400 > th dose independent rect. 20 22
610 37.07 precipitation 0.1 14400 < th dose independent rect. 20 22
613 37.07 precipitation 0.1 14400 < th dose dependent rect. 20 22
616 37.08 temperature 20.0 14400 > th dose dependent rect. 17 1
626 37.09 humidity 90.0 14400 < th dose independent rect. 21 1
635 37.10 precipitation 0.1 43200 > th dose independent rect. 19 2
658 37.11 humidity 80.0 14400 > th dose dependent rect. 21 1
675 37.15 temperature 30.0 1440 < th dose independent rect. 14 22
682 37.16 temperature 30.0 1440 < th dose independent rect. 8 16
708 37.17 temperature 30.0 1440 < th dose independent no NA NA
709 37.17 precipitation 0.1 43200 < th dose independent rect. 19 2
781 37.17 precipitation 0.1 43200 < th dose dependent rect. 19 2
795 37.19 temperature 30.0 1440 > th dose independent rect. 14 22
808 37.20 temperature 30.0 1440 < th dose independent rect. 11 1
828 37.21 temperature 10.0 14400 > th dose dependent rect. 17 1
832 37.22 precipitation 0.1 14400 > th dose independent rect. 17 21
841 37.23 precipitation 0.1 14400 < th dose independent rect. 17 21
842 37.23 temperature 25.0 1440 > th dose dependent rect. 18 1
844 37.23 precipitation 0.1 14400 < th dose dependent rect. 17 21
872 37.26 temperature 30.0 1440 > th dose independent rect. 11 1
888 37.27 wind 3.0 43200 > th dose dependent rect. 6 1
894 37.28 precipitation 0.1 43200 < th dose independent rect. 16 2
901 37.28 precipitation 0.1 43200 < th dose dependent rect. 16 2
921 37.30 temperature 30.0 1440 > th dose independent no NA NA