Os04g0543700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Serine proteinase (Fragment).
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Os04g0543700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Serine proteinase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.39 | 0.386 | 6.04 | -0.582 | 0.777 | 0.586 | -0.662 | 0.644 | 0.242 | 1.68 | 0.3728 | 6234 | -- | -- |
| 67.35 | 0.382 | 6.05 | -0.578 | 0.789 | 0.687 | -0.528 | -- | 0.258 | 1.72 | 0.4254 | 13318 | -- | -- |
| 69.07 | 0.387 | 6.04 | -0.558 | 0.779 | 0.578 | -- | 0.551 | 0.243 | 1.64 | 0.3872 | 6364 | -- | -- |
| 68.68 | 0.386 | 6.05 | -0.574 | 0.787 | 0.692 | -- | -- | 0.266 | 1.64 | 0.4256 | 13310 | -- | -- |
| 105.69 | 0.479 | 6.03 | -0.544 | -- | 0.587 | -- | 0.59 | 0.258 | -- | 0.4407 | 6231 | -- | -- |
| 79.08 | 0.417 | 6.07 | -0.386 | 0.789 | -- | -0.536 | -- | 0.17 | 1.64 | -- | -- | -- | -- |
| 80.22 | 0.419 | 6.07 | -0.368 | 0.788 | -- | -- | -- | 0.173 | 1.62 | -- | -- | -- | -- |
| 105.94 | 0.479 | 6.05 | -0.616 | -- | 0.655 | -- | -- | 0.249 | -- | 0.4787 | 6161 | -- | -- |
| 74.14 | 0.401 | 6.03 | -- | 0.797 | 0.573 | -- | -- | 0.342 | 1.59 | -0.112 | 15570 | -- | -- |
| 118.15 | 0.508 | 6.06 | -0.337 | -- | -- | -- | -- | 0.19 | -- | -- | -- | -- | -- |
| 83.8 | 0.428 | 6.06 | -- | 0.782 | -- | -- | -- | 0.214 | 1.6 | -- | -- | -- | -- |
| 112.06 | 0.493 | 6.02 | -- | -- | 0.554 | -- | -- | 0.358 | -- | -0.03012 | 15384 | -- | -- |
| 121.14 | 0.514 | 6.05 | -- | -- | -- | -- | -- | 0.228 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.16 | humidity | 50.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 2 | 66.63 | humidity | 50.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 3 | 66.66 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 4 | 66.69 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 15 | 20 |
| 5 | 66.71 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 14 |
| 7 | 66.71 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 14 |
| 8 | 66.73 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 14 |
| 12 | 66.85 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 14 | 66.90 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 18 | 66.95 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 9 |
| 21 | 66.96 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 11 |
| 22 | 66.97 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 24 | 66.97 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 10 | 9 |
| 25 | 66.97 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 12 |
| 26 | 66.97 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 14 |
| 28 | 66.97 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 30 | 66.98 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 10 | 9 |
| 34 | 66.98 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 10 | 9 |
| 39 | 67.01 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 11 |
| 40 | 67.01 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 11 |
| 47 | 67.04 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 72 | 67.10 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 15 |
| 79 | 67.19 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 82 | 67.20 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 14 | 5 |
| 84 | 67.20 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 14 | 5 |
| 89 | 67.23 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 14 | 5 |
| 101 | 67.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 103 | 67.36 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 19 |
| 106 | 67.38 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 109 | 67.38 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 22 |
| 112 | 67.41 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 3 |
| 113 | 67.41 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 3 |
| 114 | 67.41 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 3 |
| 119 | 67.42 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 9 |
| 156 | 67.66 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 1 | NA |
| 161 | 67.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 18 |
| 171 | 67.70 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 22 |
| 189 | 67.76 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 226 | 67.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 18 |
| 234 | 67.89 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 240 | 67.90 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 16 | NA |
| 244 | 67.91 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 14 |
| 245 | 67.91 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 16 |
| 263 | 67.95 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 264 | 67.95 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 266 | 67.95 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 271 | 67.96 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 272 | 67.96 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 18 | 9 |
| 275 | 67.96 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 294 | 67.98 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 295 | 67.98 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 328 | 68.04 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 11 |
| 345 | 68.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 22 |
| 352 | 68.08 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 398 | 68.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 21 |
| 399 | 68.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 23 |
| 407 | 68.19 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 9 |
| 408 | 68.19 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 9 |
| 411 | 68.19 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 9 |
| 427 | 68.21 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 436 | 68.22 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 444 | 68.23 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 15 |
| 465 | 68.27 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 15 |
| 490 | 68.29 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 491 | 68.29 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 495 | 68.29 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 17 |
| 499 | 68.29 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 17 |
| 502 | 68.30 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 17 |
| 515 | 68.31 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 516 | 68.31 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 546 | 68.33 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 556 | 68.34 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 20 | 15 |
| 576 | 68.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 14 |
| 585 | 68.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 14 |
| 586 | 68.38 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 590 | 68.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 14 |
| 640 | 68.46 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 12 |
| 644 | 68.46 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 12 |
| 647 | 68.47 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 12 |
| 675 | 68.49 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 693 | 68.52 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 0 | NA |
| 694 | 68.52 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 0 | NA |
| 701 | 68.52 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 0 | NA |
| 757 | 68.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 21 |
| 758 | 68.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 21 |
| 760 | 68.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 21 |
| 791 | 68.60 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 8 | 3 |
| 813 | 68.62 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 819 | 68.62 | wind | 1.0 | 4320 | > th | dose independent | rect. | 9 | 13 |
| 823 | 68.62 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 18 |
| 838 | 68.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 18 |
| 847 | 68.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 18 |
| 865 | 68.65 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 16 | 20 |
| 875 | 68.67 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 19 | NA |
| 877 | 68.67 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 19 | NA |
| 884 | 68.67 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 19 | NA |
| 908 | 68.69 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 946 | 68.69 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 964 | 68.70 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 16 |
| 965 | 68.70 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 16 |
| 971 | 68.70 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 16 |
| 979 | 68.71 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 982 | 68.72 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 986 | 68.72 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 990 | 68.73 | humidity | 60.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 995 | 68.73 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |