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Os04g0541500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Diacylglycerol kinase, catalytic region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0142) R2 : 0.579
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.887 (0.037) R2dC : 0.533 R2C : 0.528
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.197 (0.03) R2dN8 : 0.0513 R2N8 : 0.0464
σ : 0.269
deviance : 32.99
__
_____
C
peak time of C : 4.81
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.46 0.202 11.3 0.449 0.892 0.449 -0.482 2.06 0.24 4.73 0.8301 1428 -- --
19.48 0.206 11.3 0.645 0.844 0.282 -0.536 -- 0.314 4.4 8.489 2610 -- --
19.04 0.203 11.3 0.452 0.892 0.461 -- 2.11 0.24 4.66 0.83 1412 -- --
20.18 0.209 11.3 0.657 0.844 0.294 -- -- 0.322 5.09 9.999 3098 -- --
25.54 0.235 11.3 0.793 -- 1.16 -- 0.0946 0.418 -- 4.72 2067 -- --
20.62 0.213 11.3 0.662 0.878 -- -0.534 -- 0.268 4.81 -- -- -- --
21.36 0.216 11.3 0.664 0.875 -- -- -- 0.271 4.83 -- -- -- --
25.1 0.233 11.3 0.792 -- 1.25 -- -- 0.431 -- 3.87 2055 -- --
30.9 0.259 11.3 -- 0.857 0.358 -- -- 0.276 5 10 3041 -- --
61.8 0.367 11.3 0.697 -- -- -- -- 0.293 -- -- -- -- --
32.99 0.269 11.3 -- 0.887 -- -- -- 0.197 4.81 -- -- -- --
34.29 0.273 11.3 -- -- 0.977 -- -- 0.272 -- 8.887 588 -- --
74.61 0.403 11.3 -- -- -- -- -- 0.216 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.42 precipitation 0.1 14400 > th dose independent rect. 19 1
2 17.45 precipitation 0.1 14400 < th dose independent rect. 19 1
3 17.45 precipitation 0.1 14400 < th dose dependent rect. 19 1
4 17.57 precipitation 0.1 14400 > th dose dependent rect. 19 1
5 17.78 atmosphere 1010.0 30 < th dose independent rect. 19 21
7 17.90 wind 9.0 14400 > th dose dependent rect. 9 2
12 18.02 humidity 90.0 720 > th dose dependent rect. 7 12
18 18.10 radiation 1.0 1440 < th dose dependent rect. 7 10
20 18.12 wind 3.0 43200 < th dose dependent rect. 3 4
22 18.14 wind 3.0 43200 < th dose dependent rect. 1 5
28 18.20 humidity 90.0 1440 > th dose dependent rect. 8 6
33 18.21 precipitation 0.1 14400 > th dose dependent rect. 7 7
36 18.23 precipitation 0.1 1440 > th dose independent rect. 7 4
39 18.23 humidity 90.0 1440 > th dose dependent rect. 8 4
40 18.23 precipitation 0.1 1440 > th dose dependent rect. 7 4
55 18.25 precipitation 0.1 14400 > th dose dependent rect. 9 5
59 18.25 precipitation 0.1 14400 > th dose dependent rect. 9 7
62 18.26 precipitation 0.1 1440 > th dose independent rect. 5 6
73 18.27 radiation 1.0 1440 < th dose dependent sin 1 NA
92 18.29 wind 3.0 43200 > th dose independent rect. 5 1
93 18.29 precipitation 0.1 14400 > th dose independent rect. 9 5
102 18.29 radiation 1.0 1440 < th dose dependent rect. 6 16
105 18.30 precipitation 0.1 14400 > th dose independent rect. 12 4
109 18.30 precipitation 0.1 1440 > th dose dependent rect. 5 6
115 18.30 wind 1.0 43200 > th dose dependent rect. 23 10
118 18.30 radiation 1.0 1440 < th dose dependent rect. 6 13
125 18.31 wind 1.0 43200 > th dose independent rect. 1 1
126 18.31 wind 3.0 43200 < th dose independent rect. 4 2
138 18.32 precipitation 0.1 14400 > th dose independent rect. 9 7
139 18.32 humidity 90.0 720 > th dose dependent sin 22 NA
148 18.32 wind 1.0 43200 > th dose dependent rect. 24 8
157 18.33 precipitation 0.1 14400 < th dose independent rect. 12 4
163 18.33 precipitation 0.1 14400 < th dose dependent rect. 12 4
178 18.34 wind 1.0 43200 > th dose dependent rect. 4 3
199 18.35 wind 3.0 43200 < th dose independent rect. 4 5
200 18.35 precipitation 0.1 14400 < th dose independent rect. 9 7
204 18.35 radiation 1.0 1440 < th dose dependent rect. 7 4
210 18.35 precipitation 0.1 14400 < th dose dependent rect. 9 7
217 18.35 precipitation 0.1 14400 > th dose dependent rect. 4 10
222 18.36 wind 9.0 14400 < th dose independent rect. 9 2
223 18.36 humidity 90.0 1440 > th dose independent rect. 9 5
225 18.36 precipitation 0.1 14400 < th dose independent rect. 9 5
228 18.36 precipitation 0.1 1440 < th dose independent rect. 5 7
230 18.36 precipitation 0.1 14400 < th dose dependent rect. 9 5
236 18.36 precipitation 0.1 1440 < th dose dependent rect. 5 7
245 18.37 wind 3.0 43200 > th dose independent rect. 4 5
248 18.37 wind 1.0 43200 < th dose independent rect. 23 7
249 18.37 wind 3.0 43200 < th dose independent rect. 24 9
257 18.37 precipitation 0.1 14400 > th dose dependent rect. 11 5
264 18.38 wind 9.0 14400 > th dose independent rect. 9 2
292 18.39 wind 1.0 43200 < th dose independent rect. 24 5
296 18.39 wind 1.0 43200 > th dose dependent rect. 5 1
304 18.39 humidity 90.0 14400 > th dose dependent rect. 2 8
315 18.39 radiation 1.0 1440 < th dose dependent rect. 20 21
321 18.40 wind 3.0 43200 > th dose independent rect. 24 9
338 18.40 radiation 1.0 1440 < th dose dependent rect. 16 19
339 18.40 radiation 1.0 1440 < th dose dependent rect. 22 19
341 18.41 precipitation 0.1 1440 > th dose independent sin 6 NA
342 18.41 humidity 80.0 43200 < th dose independent rect. 5 2
350 18.41 precipitation 0.1 1440 < th dose independent rect. 22 19
377 18.41 precipitation 0.1 1440 < th dose dependent rect. 22 19
379 18.42 precipitation 0.1 1440 < th dose independent sin 6 NA
381 18.42 radiation 1.0 1440 < th dose independent rect. 7 4
383 18.42 wind 1.0 43200 > th dose independent rect. 24 6
385 18.42 precipitation 0.1 14400 > th dose independent rect. 7 9
386 18.42 precipitation 0.1 1440 < th dose independent rect. 22 14
387 18.42 precipitation 0.1 1440 < th dose dependent sin 6 NA
401 18.42 precipitation 0.1 1440 < th dose dependent rect. 22 14
412 18.43 radiation 1.0 1440 > th dose independent rect. 7 4
420 18.43 temperature 15.0 90 > th dose independent rect. 19 21
450 18.43 precipitation 0.1 1440 > th dose dependent rect. 15 20
456 18.44 radiation 1.0 1440 < th dose independent sin 2 NA
470 18.44 precipitation 0.1 1440 > th dose independent rect. 23 14
508 18.45 precipitation 0.1 14400 > th dose independent rect. 7 7
509 18.45 precipitation 0.1 14400 < th dose independent rect. 7 9
513 18.45 precipitation 0.1 1440 > th dose independent rect. 23 12
516 18.45 precipitation 0.1 1440 > th dose independent rect. 23 18
518 18.45 humidity 80.0 43200 < th dose dependent rect. 5 2
525 18.45 precipitation 0.1 14400 < th dose dependent rect. 7 9
586 18.47 precipitation 0.1 14400 > th dose independent rect. 4 12
593 18.47 humidity 80.0 43200 < th dose dependent rect. 3 5
614 18.48 radiation 1.0 1440 > th dose independent sin 3 NA
619 18.48 humidity 90.0 1440 < th dose independent rect. 9 5
629 18.48 precipitation 0.1 14400 > th dose independent rect. 4 10
630 18.48 radiation 1.0 1440 < th dose independent rect. 6 11
633 18.48 precipitation 0.1 14400 < th dose independent rect. 4 12
638 18.48 precipitation 0.1 1440 > th dose independent rect. 24 21
659 18.48 precipitation 0.1 14400 < th dose dependent rect. 4 12
679 18.49 wind 1.0 43200 < th dose independent rect. 1 1
697 18.49 wind 7.0 43200 < th dose dependent sin 8 NA
698 18.49 precipitation 0.1 1440 > th dose dependent sin 7 NA
729 18.50 wind 3.0 43200 < th dose independent rect. 7 1
732 18.50 precipitation 0.1 1440 < th dose independent rect. 7 5
739 18.50 precipitation 0.1 14400 < th dose independent rect. 4 10
741 18.50 radiation 1.0 1440 > th dose independent rect. 6 11
747 18.50 radiation 1.0 1440 > th dose independent rect. 18 23
748 18.50 wind 1.0 43200 > th dose dependent sin 8 NA
751 18.50 radiation 1.0 1440 < th dose dependent no NA NA
758 18.50 precipitation 0.1 1440 < th dose dependent rect. 7 5
764 18.50 precipitation 0.1 14400 < th dose dependent rect. 4 10
789 18.50 precipitation 0.1 1440 > th dose dependent rect. 18 19
798 18.50 precipitation 0.1 1440 > th dose dependent rect. 24 21
811 18.50 radiation 1.0 1440 < th dose dependent rect. 22 23
815 18.51 radiation 1.0 14400 > th dose independent rect. 7 1
816 18.51 precipitation 0.1 1440 < th dose independent rect. 5 3
819 18.51 precipitation 0.1 14400 < th dose independent rect. 7 7
827 18.51 radiation 1.0 1440 < th dose independent rect. 18 23
830 18.51 precipitation 0.1 43200 > th dose dependent rect. 13 1
835 18.51 precipitation 0.1 1440 < th dose dependent rect. 5 3
840 18.51 precipitation 0.1 14400 < th dose dependent rect. 7 7
861 18.51 precipitation 0.1 1440 > th dose dependent rect. 22 15
862 18.51 precipitation 0.1 1440 > th dose dependent rect. 18 17
881 18.52 humidity 90.0 1440 > th dose independent rect. 9 3
894 18.52 precipitation 0.1 1440 < th dose independent rect. 24 21
918 18.52 precipitation 0.1 1440 > th dose dependent rect. 22 13
929 18.52 precipitation 0.1 1440 < th dose dependent rect. 24 21
933 18.53 humidity 90.0 14400 < th dose independent rect. 13 1
934 18.53 radiation 1.0 14400 < th dose independent rect. 7 1
935 18.53 humidity 80.0 43200 > th dose independent rect. 5 2
955 18.53 humidity 90.0 720 > th dose independent rect. 6 14
968 18.53 radiation 1.0 1440 < th dose independent rect. 22 19
980 18.53 precipitation 0.1 43200 > th dose dependent rect. 16 1