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Os04g0531500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Concanavalin A-like lectin/glucanase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0233) R2 : 0.637
β1 : 2.36 (0.0854) R2dD : 0.63 R2D : 0.501
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.563 (0.0498) R2dN8 : 0.136 R2N8 : 0.0074
σ : 0.438
deviance : 87.66
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
63 0.373 11.7 2.33 0.599 0.195 -0.304 -1.97 0.6 15.5 1.331 1494 -- --
66.09 0.379 11.7 2.27 0.615 0.29 -0.0189 -- 0.608 15.4 1.6 3220 -- --
63.21 0.37 11.7 2.35 0.592 0.2 -- -2.03 0.6 15.4 1.5 1467 -- --
65.87 0.378 11.7 2.29 0.628 0.347 -- -- 0.648 15.6 1.7 3220 -- --
82.94 0.424 11.7 2.37 -- 0.0723 -- -1.95 0.569 -- 1.505 1536 -- --
67.32 0.385 11.7 2.39 0.599 -- -0.227 -- 0.58 15.3 -- -- -- --
67.48 0.385 11.7 2.38 0.598 -- -- -- 0.578 15.3 -- -- -- --
78.73 0.415 11.7 2.48 -- -0.315 -- -- 0.573 -- 2.9 3929 -- --
104.01 0.475 11.8 -- 0.525 1.68 -- -- -0.0108 15.8 7.5 47520 -- --
87.66 0.438 11.7 2.36 -- -- -- -- 0.563 -- -- -- -- --
217.11 0.689 11.7 -- 0.551 -- -- -- 0.313 15.3 -- -- -- --
122.32 0.515 11.8 -- -- 1.93 -- -- 0.0802 -- 8.9 32726 -- --
234.25 0.714 11.7 -- -- -- -- -- 0.301 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 59.89 humidity 90.0 14400 > th dose dependent rect. 3 2
3 60.02 wind 5.0 90 < th dose independent rect. 7 22
5 60.17 atmosphere 995.0 720 > th dose independent rect. 11 20
6 60.20 wind 1.0 720 > th dose independent rect. 19 4
7 60.22 humidity 90.0 14400 > th dose independent rect. 3 2
8 60.27 wind 9.0 720 < th dose independent rect. 7 12
9 60.32 precipitation 0.1 720 < th dose independent rect. 7 12
10 60.32 precipitation 0.1 720 < th dose dependent rect. 7 12
13 60.46 atmosphere 995.0 720 > th dose independent rect. 19 21
15 60.48 wind 3.0 14400 > th dose dependent rect. 17 3
19 60.67 wind 5.0 14400 > th dose independent rect. 17 3
21 60.68 wind 3.0 14400 > th dose dependent rect. 19 1
24 60.73 humidity 90.0 14400 < th dose independent rect. 3 1
26 60.76 wind 5.0 14400 < th dose independent rect. 17 3
27 60.77 wind 3.0 14400 > th dose dependent rect. 17 1
29 60.79 wind 9.0 14400 < th dose dependent rect. 17 5
32 60.84 wind 9.0 720 < th dose independent rect. 23 20
43 60.94 wind 9.0 720 < th dose independent rect. 7 21
45 60.95 wind 9.0 14400 < th dose dependent rect. 17 1
50 60.98 wind 7.0 90 < th dose independent rect. 17 12
65 61.06 precipitation 0.1 720 < th dose independent rect. 16 3
66 61.06 precipitation 0.1 720 < th dose dependent rect. 16 3
70 61.10 precipitation 0.1 720 < th dose independent rect. 23 20
72 61.10 precipitation 0.1 720 < th dose dependent rect. 23 20
86 61.22 radiation 10.0 270 < th dose independent rect. 19 12
90 61.23 wind 5.0 90 < th dose independent rect. 8 12
94 61.24 atmosphere 995.0 720 > th dose independent rect. 4 19
95 61.24 precipitation 0.1 720 < th dose independent rect. 7 21
99 61.24 precipitation 0.1 720 < th dose dependent rect. 7 21
103 61.28 wind 5.0 14400 < th dose independent rect. 16 8
133 61.38 wind 7.0 43200 > th dose dependent rect. 18 2
137 61.39 wind 5.0 14400 > th dose independent rect. 16 8
143 61.41 wind 7.0 720 < th dose independent rect. 16 3
164 61.46 temperature 10.0 720 > th dose independent rect. 7 12
165 61.46 temperature 10.0 720 > th dose independent rect. 19 12
166 61.46 temperature 30.0 720 < th dose independent rect. 19 12
167 61.46 humidity 50.0 720 > th dose independent rect. 19 12
168 61.46 atmosphere 995.0 720 > th dose independent rect. 19 12
169 61.46 atmosphere 1015.0 720 < th dose independent rect. 7 12
170 61.46 radiation 30.0 720 < th dose independent rect. 19 12
175 61.47 wind 9.0 4320 < th dose independent rect. 24 9
186 61.50 atmosphere 995.0 720 > th dose independent rect. 11 5
200 61.55 wind 7.0 270 < th dose independent rect. 15 12
208 61.57 wind 9.0 720 < th dose independent rect. 19 12
212 61.58 wind 1.0 43200 < th dose independent rect. 12 20
222 61.61 wind 9.0 14400 < th dose independent rect. 17 2
237 61.65 wind 9.0 14400 > th dose independent rect. 17 2
244 61.66 wind 3.0 1440 < th dose dependent rect. 2 5
254 61.69 wind 1.0 43200 > th dose independent rect. 13 19
269 61.72 wind 9.0 720 < th dose dependent rect. 4 3
277 61.74 wind 1.0 43200 < th dose independent rect. 16 19
324 61.83 atmosphere 995.0 720 > th dose independent rect. 11 12
334 61.84 precipitation 0.1 90 < th dose independent rect. 17 12
340 61.84 precipitation 0.1 90 < th dose dependent rect. 17 12
348 61.88 wind 9.0 14400 > th dose independent rect. 16 5
353 61.88 wind 7.0 14400 > th dose dependent rect. 22 13
371 61.91 wind 9.0 90 < th dose dependent rect. 8 13
412 61.97 wind 9.0 90 < th dose dependent rect. 7 22
414 61.98 humidity 50.0 90 > th dose independent rect. 5 12
416 61.98 wind 3.0 1440 < th dose dependent rect. 5 1
428 62.00 wind 1.0 43200 < th dose dependent rect. 4 20
430 62.01 wind 9.0 14400 < th dose independent rect. 16 5
436 62.02 wind 9.0 720 < th dose independent rect. 7 4
440 62.03 wind 9.0 4320 < th dose independent rect. 7 1
442 62.03 wind 7.0 720 < th dose independent rect. 4 3
446 62.03 wind 1.0 43200 < th dose dependent rect. 2 22
454 62.05 wind 7.0 14400 > th dose independent rect. 23 5
461 62.07 wind 7.0 14400 < th dose independent rect. 23 5
473 62.08 precipitation 0.1 4320 > th dose independent rect. 17 1
474 62.08 wind 7.0 14400 > th dose independent rect. 22 8
494 62.10 wind 7.0 14400 < th dose independent rect. 23 7
499 62.11 precipitation 0.1 720 < th dose independent rect. 7 4
504 62.11 precipitation 0.1 720 < th dose dependent rect. 7 4
512 62.12 temperature 10.0 720 > th dose independent rect. 7 4
513 62.12 atmosphere 995.0 720 > th dose independent rect. 7 4
514 62.12 atmosphere 1015.0 720 < th dose independent rect. 7 4
520 62.12 temperature 10.0 720 > th dose independent rect. 11 20
529 62.12 wind 1.0 43200 < th dose dependent rect. 2 19
543 62.14 humidity 70.0 720 > th dose independent rect. 4 3
544 62.14 precipitation 0.1 720 < th dose independent rect. 16 19
548 62.14 wind 1.0 43200 < th dose dependent rect. 4 15
549 62.14 precipitation 0.1 720 < th dose dependent rect. 16 19
551 62.15 wind 9.0 14400 < th dose independent rect. 21 12
554 62.15 wind 7.0 14400 > th dose dependent rect. 23 5
557 62.15 wind 1.0 43200 < th dose dependent rect. 2 17
558 62.15 wind 1.0 43200 < th dose dependent rect. 4 17
559 62.16 wind 5.0 14400 < th dose independent rect. 2 1
561 62.16 radiation 30.0 720 < th dose independent rect. 4 3
567 62.16 wind 1.0 43200 < th dose dependent rect. 7 2
570 62.16 wind 9.0 14400 > th dose dependent rect. 16 6
576 62.17 temperature 10.0 720 > th dose independent rect. 4 3
577 62.17 temperature 30.0 720 < th dose independent rect. 4 3
578 62.17 humidity 50.0 720 > th dose independent rect. 4 3
580 62.17 atmosphere 995.0 720 > th dose independent rect. 4 3
581 62.17 atmosphere 1015.0 720 < th dose independent rect. 4 3
583 62.17 temperature 10.0 720 > th dose independent rect. 19 4
584 62.17 temperature 30.0 720 < th dose independent rect. 19 4
585 62.17 humidity 50.0 720 > th dose independent rect. 19 4
586 62.17 atmosphere 995.0 720 > th dose independent rect. 19 4
587 62.17 radiation 1.0 720 < th dose independent rect. 19 4
594 62.17 atmosphere 995.0 720 > th dose independent rect. 1 15
595 62.17 temperature 10.0 720 > th dose independent rect. 23 20
596 62.17 temperature 10.0 720 > th dose independent rect. 7 21
597 62.17 radiation 1.0 720 < th dose dependent rect. 19 4
608 62.18 wind 5.0 14400 < th dose independent sin 15 NA
618 62.18 wind 7.0 14400 < th dose dependent sin 16 NA
623 62.18 wind 7.0 14400 > th dose dependent rect. 22 8
625 62.19 temperature 10.0 720 > th dose independent rect. 16 3
626 62.19 atmosphere 1015.0 720 < th dose independent rect. 16 3
627 62.19 radiation 40.0 720 < th dose independent rect. 16 3
629 62.19 temperature 10.0 720 > th dose independent rect. 19 21
645 62.20 atmosphere 1000.0 270 < th dose dependent sin 14 NA
648 62.20 atmosphere 1000.0 270 < th dose dependent rect. 15 12
676 62.23 wind 5.0 14400 > th dose independent rect. 2 1
686 62.23 wind 3.0 14400 > th dose dependent sin 15 NA
692 62.24 wind 1.0 720 > th dose independent rect. 17 2
702 62.24 precipitation 0.1 4320 > th dose dependent rect. 17 1
703 62.24 wind 3.0 14400 > th dose dependent rect. 1 2
707 62.24 wind 1.0 43200 < th dose dependent rect. 4 12
725 62.25 radiation 30.0 270 < th dose dependent rect. 19 12
736 62.26 wind 1.0 43200 < th dose independent rect. 22 14
738 62.26 wind 9.0 720 < th dose independent rect. 16 19
745 62.27 wind 1.0 43200 < th dose independent sin 6 NA
748 62.27 precipitation 0.1 720 < th dose independent rect. 4 3
756 62.27 temperature 20.0 90 > th dose dependent rect. 5 2
757 62.27 precipitation 0.1 720 < th dose dependent rect. 4 3
764 62.28 wind 5.0 14400 > th dose independent sin 15 NA
779 62.28 humidity 50.0 270 > th dose dependent rect. 19 12
787 62.29 wind 9.0 720 < th dose independent rect. 19 4
796 62.29 wind 1.0 43200 < th dose dependent rect. 5 7
840 62.32 wind 1.0 43200 < th dose independent rect. 2 22
857 62.33 wind 1.0 1440 < th dose independent rect. 4 6
868 62.33 wind 1.0 43200 < th dose dependent rect. 23 20
872 62.34 wind 1.0 43200 > th dose independent rect. 6 3
875 62.34 wind 1.0 1440 < th dose independent rect. 4 9
911 62.36 wind 1.0 43200 < th dose independent rect. 22 17
948 62.38 wind 9.0 4320 < th dose independent rect. 7 3
958 62.38 wind 9.0 720 < th dose independent rect. 1 18
961 62.38 wind 1.0 43200 < th dose independent rect. 22 21