Os04g0531400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Lectin-like receptor kinase 7;2.
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Os04g0531400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Lectin-like receptor kinase 7;2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.3 | 0.368 | 10.3 | 0.766 | 0.881 | 1.11 | 0.221 | 0.81 | 0.0725 | 9.72 | 14.39 | 7125 | -- | -- |
| 61.79 | 0.366 | 10.4 | 0.599 | 0.879 | 0.98 | 0.221 | -- | 0.0178 | 9.7 | 16.38 | 7137 | -- | -- |
| 61.49 | 0.365 | 10.3 | 0.772 | 0.881 | 1.11 | -- | 0.804 | 0.0741 | 9.73 | 14.4 | 7134 | -- | -- |
| 61.97 | 0.367 | 10.4 | 0.609 | 0.877 | 0.976 | -- | -- | 0.0207 | 9.71 | 16.41 | 7137 | -- | -- |
| 107.14 | 0.482 | 10.4 | 0.815 | -- | 1.13 | -- | 0.959 | 0.092 | -- | 13.05 | 7253 | -- | -- |
| 83.01 | 0.427 | 10.3 | 1.14 | 0.867 | -- | 0.182 | -- | 0.313 | 9.5 | -- | -- | -- | -- |
| 83.13 | 0.427 | 10.3 | 1.15 | 0.866 | -- | -- | -- | 0.314 | 9.52 | -- | -- | -- | -- |
| 107.4 | 0.483 | 10.4 | 0.466 | -- | 1.01 | -- | -- | -0.0691 | -- | 16.97 | 11609 | -- | -- |
| 63.59 | 0.371 | 10.4 | -- | 0.901 | 1.2 | -- | -- | -0.168 | 9.59 | 14.2 | 26372 | -- | -- |
| 127.26 | 0.527 | 10.3 | 1.14 | -- | -- | -- | -- | 0.316 | -- | -- | -- | -- | -- |
| 117.71 | 0.508 | 10.3 | -- | 0.864 | -- | -- | -- | 0.186 | 9.42 | -- | -- | -- | -- |
| 109.74 | 0.488 | 10.4 | -- | -- | 1.22 | -- | -- | -0.167 | -- | 9.295 | 37512 | -- | -- |
| 161.5 | 0.593 | 10.4 | -- | -- | -- | -- | -- | 0.189 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.53 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 12 |
| 4 | 57.67 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 18 | 12 |
| 6 | 58.34 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 17 |
| 7 | 58.35 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 21 | 58.54 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 5 |
| 35 | 58.61 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 21 | 9 |
| 50 | 58.78 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 60 | 59.03 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 65 | 59.25 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 84 | 59.65 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 88 | 59.87 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 12 |
| 90 | 59.90 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 12 |
| 103 | 60.11 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 15 | 17 |
| 105 | 60.13 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 16 | 15 |
| 107 | 60.19 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 16 | 15 |
| 112 | 60.28 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 16 | 17 |
| 120 | 60.32 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 126 | 60.35 | temperature | 30.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 127 | 60.36 | temperature | 30.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 142 | 60.48 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 144 | 60.50 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 164 | 60.51 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 167 | 60.51 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 12 | 21 |
| 168 | 60.52 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 169 | 60.52 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 14 |
| 173 | 60.53 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 221 | 60.58 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 223 | 60.58 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 14 | 19 |
| 268 | 60.62 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 12 | 3 |
| 308 | 60.65 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 355 | 60.72 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 433 | 60.77 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 440 | 60.78 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 16 |
| 444 | 60.80 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 445 | 60.80 | radiation | 40.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 447 | 60.80 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 561 | 60.82 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 16 |
| 564 | 60.82 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 21 |
| 569 | 60.83 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 574 | 60.83 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 11 |
| 590 | 60.83 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 4 | 15 |
| 670 | 60.83 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 716 | 60.86 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 724 | 60.87 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 755 | 60.88 | radiation | 40.0 | 4320 | > th | dose dependent | sin | 14 | NA |
| 756 | 60.88 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 775 | 60.91 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 13 |
| 779 | 60.92 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 801 | 60.93 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 16 |
| 818 | 60.96 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 831 | 60.97 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 17 | 7 |
| 851 | 61.00 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 890 | 61.03 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 892 | 61.03 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 894 | 61.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 19 |
| 903 | 61.05 | radiation | 10.0 | 4320 | < th | dose independent | sin | 12 | NA |
| 904 | 61.05 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 944 | 61.09 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 17 | 3 |
| 948 | 61.10 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 949 | 61.10 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 967 | 61.12 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 988 | 61.14 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 15 |