Os04g0530900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 8 protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0530900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Glycosyl transferase, family 8 protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 499.76 | 1.05 | 7.61 | -6.73 | 1.14 | 3.81 | -0.866 | -7.74 | -0.979 | 12.5 | 26.68 | 1234 | -- | -- |
| 512.83 | 1.05 | 7.41 | -4.95 | 1.14 | 2.92 | -0.453 | -- | -0.692 | 12.5 | 26.87 | 1233 | -- | -- |
| 502.86 | 1.04 | 7.6 | -6.71 | 1.14 | 3.8 | -- | -7.49 | -0.966 | 12.4 | 26.72 | 1234 | -- | -- |
| 513.33 | 1.06 | 7.39 | -4.95 | 1.13 | 2.98 | -- | -- | -0.589 | 12.5 | 26.93 | 1230 | -- | -- |
| 570.4 | 1.11 | 7.61 | -6.62 | -- | 3.35 | -- | -6.58 | -0.974 | -- | 26.7 | 1360 | -- | -- |
| 873.84 | 1.39 | 7.38 | -4 | 0.619 | -- | -1.32 | -- | -0.558 | 12.5 | -- | -- | -- | -- |
| 880.82 | 1.39 | 7.38 | -4.06 | 0.628 | -- | -- | -- | -0.566 | 11.9 | -- | -- | -- | -- |
| 580.42 | 1.12 | 7.41 | -4.96 | -- | 2.65 | -- | -- | -0.637 | -- | 26.74 | 1360 | -- | -- |
| 1109.06 | 1.55 | 7.15 | -- | 1 | 2.12 | -- | -- | 0.332 | 12 | 30.4 | 1168 | -- | -- |
| 905.65 | 1.41 | 7.39 | -4.07 | -- | -- | -- | -- | -0.575 | -- | -- | -- | -- | -- |
| 1314.24 | 1.7 | 7.28 | -- | 0.683 | -- | -- | -- | -0.115 | 12.3 | -- | -- | -- | -- |
| 1168.32 | 1.59 | 7.2 | -- | -- | 1.84 | -- | -- | 0.283 | -- | 30.4 | 1230 | -- | -- |
| 1343.55 | 1.71 | 7.29 | -- | -- | -- | -- | -- | -0.123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 532.04 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 2 | 532.07 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 8 | 532.31 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 11 | 532.41 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 16 | 532.51 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 33 | 532.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 37 | 532.94 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 88 | 533.92 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 134 | 534.88 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 135 | 534.90 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 141 | 534.98 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 197 | 536.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 248 | 538.40 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 301 | 542.94 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 305 | 543.56 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 314 | 543.71 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 316 | 543.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 317 | 543.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 13 |
| 349 | 545.05 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 351 | 545.18 | temperature | 30 | 1440 | < th | dose independent | sin | 18 | NA |
| 363 | 545.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 385 | 546.22 | temperature | 30 | 1440 | > th | dose independent | sin | 16 | NA |
| 389 | 546.46 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 390 | 546.47 | temperature | 30 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 393 | 546.49 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 412 | 546.55 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 414 | 546.55 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 417 | 546.57 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 418 | 546.57 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 20 |
| 424 | 546.59 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 444 | 546.60 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 536 | 547.04 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 607 | 547.90 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 790 | 549.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 793 | 549.10 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 800 | 549.41 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 14 |
| 818 | 549.53 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 16 |
| 831 | 549.77 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 926 | 549.78 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 941 | 549.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 944 | 549.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 951 | 549.87 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 10 |
| 955 | 549.89 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 9 |
| 963 | 549.93 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 7 |