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Os04g0530300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0117) R2 : 0.426
β1 : 0.78 (0.0428) R2dD : 0.434 R2D : 0.367
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.147 (0.0249) R2dN8 : 0.0585 R2N8 : -0.00806
σ : 0.219
deviance : 22.03
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13.48 0.173 11.9 0.797 0.376 0.244 0.133 -0.15 0.164 16.3 2.713 36 -- --
13.59 0.172 11.9 0.79 0.376 0.246 0.221 -- 0.159 16.2 2.874 39 -- --
13.52 0.171 11.9 0.8 0.378 0.244 -- -0.187 0.164 16.3 2.599 37 -- --
13.72 0.172 11.9 0.794 0.397 0.259 -- -- 0.168 16.2 3.216 49 -- --
19.41 0.206 11.9 0.788 -- 0.148 -- -0.201 0.15 -- 1.148 30 -- --
14.87 0.181 11.9 0.786 0.367 -- 0.00836 -- 0.153 19.3 -- -- -- --
14.88 0.181 11.9 0.786 0.367 -- -- -- 0.153 19.3 -- -- -- --
19.66 0.207 11.9 0.783 -- 0.148 -- -- 0.15 -- 1.99 15 -- --
30.07 0.255 11.9 -- 0.395 0.28 -- -- 0.0883 16.2 10 51 -- --
22.03 0.219 11.9 0.78 -- -- -- -- 0.147 -- -- -- -- --
31.17 0.261 11.9 -- 0.36 -- -- -- 0.0656 19.4 -- -- -- --
35.72 0.279 11.9 -- -- 0.15 -- -- 0.0673 -- 4.91 14 -- --
38.07 0.288 11.9 -- -- -- -- -- 0.0604 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.89 temperature 20.0 10 > th dose independent rect. 18 11
8 13.27 temperature 15.0 10 > th dose dependent rect. 18 11
9 13.28 atmosphere 1000.0 10 > th dose dependent rect. 18 3
10 13.28 radiation 1.0 30 < th dose dependent rect. 2 19
11 13.28 radiation 1.0 30 < th dose dependent rect. 24 21
14 13.30 radiation 1.0 30 < th dose independent rect. 24 21
15 13.31 radiation 1.0 30 < th dose independent rect. 2 19
17 13.32 radiation 1.0 30 < th dose dependent rect. 5 16
23 13.35 radiation 1.0 30 > th dose independent sin 23 NA
24 13.35 atmosphere 1005.0 30 > th dose independent rect. 18 3
25 13.35 temperature 20.0 10 > th dose independent rect. 18 16
31 13.38 radiation 1.0 30 < th dose dependent rect. 7 14
33 13.39 temperature 20.0 10 > th dose independent rect. 18 18
36 13.40 radiation 1.0 30 < th dose independent rect. 5 16
41 13.42 radiation 1.0 30 < th dose independent rect. 7 14
42 13.42 radiation 1.0 30 < th dose dependent sin 23 NA
43 13.42 radiation 1.0 30 < th dose dependent rect. 11 10
50 13.43 radiation 1.0 30 < th dose dependent rect. 13 8
55 13.44 wind 3.0 30 > th dose independent rect. 18 3
56 13.44 radiation 1.0 30 > th dose independent rect. 5 13
74 13.46 radiation 1.0 30 < th dose dependent rect. 15 6
80 13.47 precipitation 0.1 10 < th dose independent rect. 21 21
81 13.47 precipitation 0.1 10 < th dose dependent rect. 21 21
82 13.48 wind 7.0 10 < th dose independent rect. 18 3
83 13.48 radiation 1.0 30 < th dose independent rect. 13 8
89 13.48 temperature 15.0 10 > th dose independent rect. 21 21
97 13.50 wind 1.0 10 > th dose independent rect. 21 21
106 13.51 radiation 1.0 30 < th dose independent rect. 22 23
107 13.51 radiation 1.0 30 < th dose independent rect. 24 23
111 13.51 radiation 1.0 30 < th dose dependent rect. 24 23
114 13.52 radiation 1.0 30 < th dose independent rect. 15 6
122 13.52 radiation 1.0 30 < th dose dependent rect. 22 23
124 13.53 radiation 1.0 30 < th dose independent sin 23 NA
126 13.53 temperature 10.0 10 > th dose independent rect. 18 3
128 13.53 humidity 50.0 10 > th dose independent rect. 18 3
130 13.53 atmosphere 1010.0 10 < th dose independent rect. 18 3
132 13.53 radiation 10.0 10 < th dose independent rect. 18 3
139 13.53 radiation 1.0 30 < th dose independent rect. 18 23
141 13.53 radiation 10.0 10 < th dose dependent rect. 18 3
145 13.54 radiation 1.0 30 > th dose independent no NA NA
146 13.54 radiation 1.0 30 < th dose independent no NA NA
148 13.54 precipitation 0.1 10 < th dose independent rect. 18 3
187 13.54 radiation 1.0 30 < th dose independent rect. 11 21
210 13.54 radiation 1.0 30 < th dose independent rect. 7 23
214 13.54 radiation 1.0 30 < th dose independent rect. 13 23
215 13.54 radiation 1.0 30 < th dose independent rect. 15 23
216 13.54 precipitation 0.1 10 < th dose dependent rect. 18 3
233 13.55 temperature 20.0 270 > th dose independent rect. 15 12
235 13.55 radiation 1.0 30 < th dose independent rect. 13 19
236 13.55 temperature 20.0 10 > th dose independent rect. 18 20
240 13.55 wind 9.0 30 < th dose independent rect. 21 21
242 13.55 humidity 50.0 30 > th dose independent rect. 21 21
259 13.56 atmosphere 995.0 10 > th dose dependent rect. 21 21
260 13.57 temperature 20.0 10 < th dose independent rect. 21 7
266 13.57 temperature 10.0 10 > th dose dependent rect. 18 3
268 13.57 radiation 10.0 30 < th dose dependent rect. 18 22
274 13.58 radiation 1.0 30 < th dose independent rect. 15 21
280 13.58 radiation 1.0 30 < th dose dependent no NA NA
281 13.58 humidity 70.0 1440 > th dose dependent rect. 12 3
284 13.58 radiation 1.0 30 < th dose dependent rect. 11 21
287 13.58 radiation 1.0 30 < th dose dependent rect. 7 23
291 13.58 radiation 1.0 30 < th dose dependent rect. 13 23
292 13.58 radiation 1.0 30 < th dose dependent rect. 15 23
301 13.59 radiation 1.0 30 < th dose independent rect. 15 17
312 13.59 radiation 10.0 14400 < th dose dependent rect. 19 3
317 13.60 humidity 80.0 1440 > th dose independent rect. 12 3
319 13.60 humidity 80.0 1440 < th dose independent rect. 12 3
322 13.60 wind 7.0 720 < th dose independent rect. 7 5
323 13.60 radiation 30.0 720 < th dose independent rect. 19 14
333 13.60 radiation 1.0 30 < th dose dependent rect. 13 19
366 13.62 temperature 10.0 1440 > th dose independent rect. 19 3
369 13.62 temperature 30.0 1440 < th dose independent rect. 19 3
373 13.62 humidity 50.0 1440 > th dose independent rect. 19 3
375 13.62 atmosphere 995.0 1440 > th dose independent rect. 19 3
376 13.62 radiation 1.0 1440 < th dose independent rect. 19 3
412 13.62 temperature 10.0 1440 > th dose independent rect. 22 21
423 13.62 radiation 1.0 30 > th dose independent rect. 10 23
429 13.62 radiation 20.0 1440 < th dose dependent rect. 19 3
439 13.62 radiation 1.0 30 < th dose dependent rect. 15 21
451 13.63 wind 1.0 10 > th dose dependent rect. 18 3
464 13.64 temperature 30.0 10 < th dose independent rect. 18 3
468 13.64 wind 9.0 30 < th dose dependent rect. 18 3
470 13.64 radiation 1.0 30 < th dose dependent rect. 15 17
505 13.66 radiation 30.0 720 < th dose independent rect. 3 6
530 13.67 wind 7.0 720 < th dose independent rect. 9 1
537 13.67 radiation 1.0 30 < th dose independent rect. 15 15
544 13.67 humidity 50.0 10 > th dose dependent rect. 18 3
546 13.67 humidity 70.0 1440 > th dose dependent rect. 12 7
580 13.69 temperature 20.0 10 < th dose independent rect. 21 17
583 13.69 atmosphere 995.0 10 > th dose independent rect. 21 21
586 13.69 temperature 30.0 90 < th dose dependent rect. 21 10
588 13.69 radiation 1.0 30 < th dose dependent rect. 15 15
608 13.70 radiation 30.0 720 < th dose independent rect. 15 4
619 13.70 wind 9.0 720 < th dose dependent rect. 21 1
675 13.71 humidity 90.0 30 < th dose independent rect. 21 21
717 13.71 radiation 30.0 270 < th dose dependent rect. 20 13
719 13.71 temperature 30.0 90 < th dose dependent rect. 21 15
729 13.72 radiation 10.0 720 > th dose independent rect. 12 3
737 13.72 atmosphere 1015.0 720 < th dose independent rect. 22 14
738 13.72 temperature 20.0 10 < th dose independent rect. 21 15
742 13.72 atmosphere 1015.0 720 < th dose independent rect. 7 20
744 13.72 temperature 20.0 10 > th dose independent rect. 18 22
752 13.72 radiation 10.0 30 < th dose dependent rect. 18 14
756 13.72 humidity 70.0 1440 > th dose dependent rect. 12 17
786 13.73 radiation 10.0 1440 < th dose dependent rect. 11 4
801 13.74 temperature 20.0 10 > th dose independent sin 10 NA
807 13.74 radiation 1.0 720 > th dose independent rect. 10 7
840 13.75 humidity 90.0 720 < th dose independent rect. 8 2
844 13.75 humidity 80.0 1440 < th dose independent rect. 12 8
847 13.75 temperature 20.0 10 < th dose independent rect. 9 19
863 13.75 temperature 30.0 10 < th dose dependent rect. 21 5
895 13.76 atmosphere 1015.0 270 < th dose independent rect. 15 12
898 13.76 wind 7.0 720 < th dose independent rect. 22 14
899 13.76 temperature 20.0 10 < th dose independent rect. 11 17
924 13.76 humidity 70.0 1440 > th dose dependent rect. 18 1
927 13.76 radiation 40.0 720 < th dose dependent rect. 3 6
928 13.76 radiation 10.0 720 < th dose dependent rect. 13 6
943 13.76 radiation 10.0 30 < th dose dependent rect. 18 20
967 13.77 radiation 1.0 30 < th dose independent rect. 18 20
969 13.77 precipitation 0.1 90 < th dose independent rect. 19 23
975 13.77 temperature 25.0 30 > th dose dependent rect. 18 5
986 13.77 radiation 10.0 10 < th dose dependent rect. 18 12