Os04g0529800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sugar transporter family protein.
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Os04g0529800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sugar transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.38 | 0.413 | 8.86 | 0.68 | 0.0268 | -0.52 | 0.569 | 1.84 | 0.406 | 17 | 1004 | 218 | -- | -- |
| 82.64 | 0.423 | 8.85 | 0.729 | 0.0179 | -0.552 | 0.53 | -- | 0.4 | 16 | 1004 | 197 | -- | -- |
| 78.14 | 0.412 | 8.86 | 0.675 | 0.0419 | -0.511 | -- | 1.79 | 0.405 | 15.1 | 1004 | 309 | -- | -- |
| 83.43 | 0.428 | 8.85 | 0.74 | 0.0201 | -0.578 | -- | -- | 0.408 | 20.3 | 1004 | 193 | -- | -- |
| 78.24 | 0.412 | 8.86 | 0.677 | -- | -0.517 | -- | 1.79 | 0.407 | -- | 1004 | 291 | -- | -- |
| 87.58 | 0.439 | 8.87 | 0.748 | 0.0286 | -- | 0.589 | -- | 0.302 | 16 | -- | -- | -- | -- |
| 88.46 | 0.44 | 8.87 | 0.755 | 0.0558 | -- | -- | -- | 0.305 | 19.4 | -- | -- | -- | -- |
| 83.45 | 0.427 | 8.84 | 0.74 | -- | -0.582 | -- | -- | 0.408 | -- | 1004 | 193 | -- | -- |
| 97.52 | 0.46 | 8.86 | -- | 0.00397 | -0.598 | -- | -- | 0.333 | 19.9 | 1004 | 331 | -- | -- |
| 88.63 | 0.44 | 8.87 | 0.754 | -- | -- | -- | -- | 0.304 | -- | -- | -- | -- | -- |
| 103.47 | 0.476 | 8.89 | -- | 0.0504 | -- | -- | -- | 0.221 | 20.4 | -- | -- | -- | -- |
| 97.52 | 0.46 | 8.86 | -- | -- | -0.599 | -- | -- | 0.333 | -- | 1004 | 331 | -- | -- |
| 103.61 | 0.475 | 8.89 | -- | -- | -- | -- | -- | 0.221 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.43 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 2 | 72.12 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 3 | 72.12 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 26 | 73.77 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 27 | 73.84 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 44 | 74.46 | wind | 7 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 53 | 74.72 | wind | 7 | 4320 | > th | dose independent | rect. | 15 | 5 |
| 54 | 74.72 | wind | 7 | 4320 | < th | dose independent | rect. | 15 | 5 |
| 100 | 75.58 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 101 | 75.58 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 124 | 75.91 | humidity | 80 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 129 | 75.96 | wind | 7 | 4320 | < th | dose independent | rect. | 15 | 10 |
| 166 | 76.25 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 23 | 13 |
| 215 | 76.66 | wind | 5 | 4320 | > th | dose dependent | rect. | 15 | 10 |
| 224 | 76.69 | wind | 3 | 4320 | > th | dose dependent | rect. | 17 | 9 |
| 255 | 76.92 | temperature | 20 | 30 | > th | dose independent | rect. | 12 | 23 |
| 279 | 77.06 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 11 |
| 292 | 77.13 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 293 | 77.14 | wind | 1 | 30 | > th | dose independent | rect. | 23 | 13 |
| 311 | 77.21 | wind | 3 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 352 | 77.33 | wind | 3 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 355 | 77.33 | wind | 9 | 4320 | < th | dose dependent | rect. | 17 | 10 |
| 367 | 77.38 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 376 | 77.42 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 7 | 22 |
| 407 | 77.53 | atmosphere | 1000 | 90 | > th | dose dependent | rect. | 22 | 23 |
| 477 | 77.68 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 15 |
| 488 | 77.70 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 18 | 23 |
| 494 | 77.71 | wind | 3 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 518 | 77.76 | wind | 7 | 4320 | < th | dose independent | sin | 15 | NA |
| 536 | 77.79 | wind | 7 | 4320 | > th | dose independent | sin | 15 | NA |
| 546 | 77.80 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 558 | 77.83 | wind | 9 | 4320 | < th | dose dependent | rect. | 18 | 5 |
| 585 | 77.87 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 10 | 23 |
| 593 | 77.88 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 606 | 77.91 | temperature | 15 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 615 | 77.94 | wind | 3 | 4320 | > th | dose dependent | sin | 14 | NA |
| 616 | 77.94 | atmosphere | 1005 | 270 | > th | dose dependent | no | NA | NA |
| 619 | 77.94 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 642 | 77.98 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 643 | 77.98 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 663 | 78.00 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 10 | 23 |
| 664 | 78.00 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 732 | 78.10 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 8 |
| 737 | 78.10 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 748 | 78.11 | temperature | 20 | 10 | < th | dose dependent | rect. | 22 | 23 |
| 761 | 78.12 | temperature | 20 | 10 | < th | dose dependent | rect. | 9 | 20 |
| 795 | 78.16 | temperature | 15 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 824 | 78.19 | temperature | 20 | 10 | < th | dose dependent | rect. | 19 | 22 |
| 850 | 78.23 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 22 | 14 |
| 882 | 78.27 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 15 | 21 |
| 889 | 78.27 | temperature | 20 | 10 | < th | dose dependent | rect. | 15 | 21 |
| 896 | 78.28 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 2 |
| 900 | 78.28 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 23 | 18 |
| 934 | 78.31 | temperature | 20 | 10 | < th | dose dependent | rect. | 19 | 17 |
| 947 | 78.32 | temperature | 20 | 10 | < th | dose dependent | no | NA | NA |
| 955 | 78.32 | temperature | 20 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 963 | 78.33 | atmosphere | 1005 | 10 | > th | dose dependent | no | NA | NA |
| 967 | 78.33 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 10 | 19 |
| 978 | 78.34 | temperature | 15 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 991 | 78.35 | temperature | 20 | 10 | < th | dose dependent | rect. | 22 | 19 |
| 992 | 78.35 | temperature | 20 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 999 | 78.36 | temperature | 20 | 10 | < th | dose dependent | rect. | 23 | 17 |