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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0528200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.42 (0.0291) R2 : 0.0173
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.173 (0.0612) R2dN8 : 0.0223 R2N8 : 0.0173
σ : 0.547
deviance : 137.52
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
122.03 0.519 3.43 0.00208 0.313 1.8 -0.339 1.55 0.204 22.8 7.287 382 -- --
122.12 0.515 3.42 -0.0121 0.313 1.45 -0.357 -- 0.206 22.9 7.172 381 -- --
122.5 0.515 3.43 0.019 0.316 1.9 -- 1.86 0.205 23 7.297 381 -- --
122.58 0.516 3.42 0.0109 0.313 1.41 -- -- 0.205 23.1 6.965 381 -- --
128.2 0.527 3.42 0.0616 -- 1.85 -- 1.79 0.209 -- 6.6 460 -- --
129.1 0.533 3.43 -0.148 0.342 -- -0.49 -- 0.158 21.8 -- -- -- --
129.95 0.534 3.43 -0.131 0.343 -- -- -- 0.158 22.2 -- -- -- --
128.16 0.527 3.41 0.038 -- 1.35 -- -- 0.214 -- 6.2 472 -- --
122.58 0.516 3.42 -- 0.313 1.4 -- -- 0.206 23.1 7 381 -- --
137.11 0.547 3.42 -0.126 -- -- -- -- 0.159 -- -- -- -- --
130.4 0.534 3.43 -- 0.343 -- -- -- 0.173 22.2 -- -- -- --
128.2 0.527 3.41 -- -- 1.32 -- -- 0.204 -- 6.2 472 -- --
137.52 0.547 3.42 -- -- -- -- -- 0.173 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 115.35 wind 7.0 270 < th dose independent rect. 7 10
2 116.90 wind 7.0 270 < th dose independent rect. 6 22
3 117.30 wind 7.0 270 < th dose independent rect. 7 20
5 117.60 wind 7.0 270 < th dose independent rect. 9 17
9 117.77 wind 7.0 30 < th dose independent rect. 7 23
12 117.86 radiation 1.0 30 > th dose dependent rect. 18 13
13 117.91 radiation 1.0 30 > th dose dependent rect. 5 2
31 118.58 temperature 20.0 90 > th dose independent rect. 5 2
33 118.68 radiation 1.0 90 > th dose independent rect. 5 2
45 118.76 temperature 20.0 90 > th dose dependent rect. 4 3
54 119.12 humidity 90.0 90 < th dose independent rect. 17 14
66 119.47 humidity 70.0 270 > th dose dependent rect. 21 5
67 119.48 humidity 90.0 90 < th dose independent rect. 15 16
73 119.61 temperature 20.0 90 > th dose independent rect. 4 18
92 119.67 humidity 70.0 90 > th dose dependent rect. 21 7
93 119.70 wind 9.0 270 < th dose dependent rect. 13 13
94 119.72 precipitation 0.1 270 < th dose independent rect. 17 14
95 119.72 precipitation 0.1 270 < th dose dependent rect. 17 14
96 119.74 humidity 70.0 270 > th dose dependent rect. 16 10
97 119.76 humidity 80.0 90 > th dose independent rect. 5 2
103 119.88 humidity 80.0 90 > th dose dependent rect. 16 12
106 119.93 humidity 70.0 10 > th dose dependent rect. 6 1
109 119.94 wind 5.0 10 < th dose dependent rect. 6 1
113 119.98 wind 9.0 270 < th dose dependent rect. 10 16
120 120.01 atmosphere 995.0 90 > th dose dependent rect. 5 2
121 120.03 wind 5.0 90 < th dose independent rect. 5 2
125 120.05 temperature 20.0 10 > th dose independent rect. 6 1
126 120.05 atmosphere 1005.0 90 > th dose independent rect. 5 2
128 120.06 humidity 80.0 10 > th dose independent rect. 6 1
134 120.09 radiation 1.0 10 > th dose independent rect. 6 1
136 120.10 wind 3.0 10 < th dose independent rect. 6 1
140 120.15 precipitation 0.1 270 < th dose independent rect. 7 10
142 120.15 radiation 30.0 10 < th dose dependent rect. 6 1
144 120.15 precipitation 0.1 270 < th dose dependent rect. 7 10
146 120.16 wind 9.0 90 < th dose dependent rect. 5 2
148 120.17 radiation 20.0 270 < th dose independent rect. 17 14
154 120.18 temperature 10.0 10 > th dose independent rect. 6 1
156 120.18 temperature 30.0 10 < th dose independent rect. 6 1
157 120.18 humidity 50.0 10 > th dose independent rect. 6 1
160 120.18 atmosphere 995.0 10 > th dose independent rect. 6 1
161 120.18 atmosphere 1015.0 10 < th dose independent rect. 6 1
162 120.18 radiation 20.0 10 < th dose independent rect. 6 1
165 120.18 precipitation 0.1 10 < th dose independent rect. 6 1
166 120.18 temperature 10.0 270 > th dose independent rect. 7 10
167 120.18 atmosphere 1015.0 270 < th dose independent rect. 7 10
168 120.18 temperature 10.0 270 > th dose independent rect. 17 14
171 120.18 temperature 10.0 10 > th dose independent rect. 7 23
172 120.18 precipitation 0.1 10 < th dose dependent rect. 6 1
176 120.20 precipitation 0.1 90 < th dose independent rect. 5 2
177 120.20 precipitation 0.1 90 < th dose dependent rect. 5 2
181 120.21 temperature 10.0 90 > th dose independent rect. 5 2
183 120.21 temperature 30.0 90 < th dose independent rect. 5 2
184 120.21 humidity 50.0 90 > th dose independent rect. 5 2
187 120.21 atmosphere 995.0 90 > th dose independent rect. 5 2
188 120.21 atmosphere 1015.0 90 < th dose independent rect. 5 2
189 120.21 radiation 20.0 90 < th dose independent rect. 5 2
192 120.21 temperature 10.0 90 > th dose independent rect. 7 22
194 120.21 wind 9.0 270 < th dose dependent rect. 7 19
196 120.22 wind 7.0 30 < th dose independent rect. 14 14
197 120.22 humidity 70.0 270 > th dose dependent rect. 23 2
218 120.27 wind 7.0 270 < th dose independent rect. 19 23
223 120.28 humidity 90.0 270 < th dose independent rect. 15 6
224 120.28 atmosphere 1000.0 270 > th dose dependent rect. 2 5
227 120.29 atmosphere 995.0 10 > th dose dependent rect. 6 1
230 120.30 atmosphere 1000.0 30 > th dose independent rect. 7 23
236 120.33 temperature 30.0 30 < th dose dependent rect. 6 1
273 120.41 wind 1.0 10 > th dose independent rect. 6 1
277 120.41 humidity 90.0 270 < th dose independent rect. 13 9
290 120.45 atmosphere 1015.0 10 < th dose dependent rect. 6 1
293 120.46 atmosphere 995.0 270 > th dose independent rect. 17 14
306 120.51 wind 9.0 1440 < th dose independent rect. 7 1
307 120.51 temperature 10.0 1440 > th dose independent rect. 7 1
311 120.51 temperature 30.0 1440 < th dose independent rect. 7 1
315 120.51 humidity 50.0 1440 > th dose independent rect. 7 1
320 120.51 atmosphere 995.0 1440 > th dose independent rect. 7 1
321 120.51 atmosphere 1015.0 1440 < th dose independent rect. 7 1
323 120.51 temperature 10.0 1440 > th dose independent rect. 8 23
326 120.52 humidity 90.0 30 < th dose independent rect. 6 1
328 120.52 wind 9.0 720 < th dose independent rect. 5 14
350 120.61 radiation 40.0 270 < th dose independent rect. 12 10
357 120.63 humidity 80.0 270 > th dose independent rect. 21 5
368 120.67 wind 7.0 270 < th dose independent rect. 21 18
375 120.68 wind 7.0 270 < th dose independent rect. 20 21
378 120.69 radiation 40.0 1440 < th dose independent rect. 7 1
401 120.77 humidity 50.0 270 > th dose independent rect. 17 14
404 120.78 humidity 90.0 720 < th dose independent rect. 19 1
415 120.83 wind 9.0 270 < th dose independent rect. 17 14
425 120.88 atmosphere 1005.0 270 > th dose independent rect. 3 4
429 120.88 humidity 80.0 90 > th dose dependent rect. 12 16
433 120.89 radiation 40.0 270 < th dose dependent rect. 17 14
441 120.91 wind 9.0 30 < th dose dependent rect. 14 14
443 120.92 humidity 50.0 270 > th dose independent rect. 7 10
457 121.00 radiation 10.0 10 < th dose independent rect. 5 3
461 121.00 precipitation 0.1 30 < th dose independent rect. 7 23
462 121.00 precipitation 0.1 30 < th dose dependent rect. 7 23
474 121.05 wind 9.0 720 < th dose independent rect. 3 16
489 121.06 humidity 90.0 10 < th dose dependent rect. 6 1
520 121.11 humidity 80.0 90 > th dose independent rect. 21 7
521 121.11 radiation 10.0 90 < th dose independent rect. 4 19
544 121.17 wind 7.0 720 > th dose dependent rect. 12 1
561 121.23 temperature 30.0 720 < th dose independent rect. 7 4
568 121.24 atmosphere 995.0 90 > th dose independent rect. 4 18
573 121.25 wind 7.0 270 < th dose independent rect. 21 5
575 121.25 temperature 10.0 90 > th dose dependent rect. 4 18
582 121.27 radiation 1.0 30 < th dose dependent rect. 22 9
585 121.28 radiation 1.0 30 < th dose independent rect. 22 9
596 121.30 wind 7.0 10 > th dose dependent rect. 12 15
601 121.31 wind 9.0 270 < th dose dependent rect. 21 5
605 121.32 wind 7.0 270 > th dose independent rect. 11 12
607 121.32 wind 7.0 10 > th dose dependent rect. 12 10
612 121.33 atmosphere 995.0 270 > th dose independent rect. 7 10
615 121.33 precipitation 0.1 90 < th dose independent rect. 4 18
620 121.33 precipitation 0.1 90 < th dose dependent rect. 4 18
631 121.35 temperature 10.0 90 > th dose dependent rect. 22 6
636 121.37 humidity 70.0 720 > th dose independent rect. 16 1
650 121.39 temperature 10.0 90 > th dose independent rect. 22 6
651 121.39 temperature 30.0 90 < th dose independent rect. 22 6
652 121.39 humidity 50.0 90 > th dose independent rect. 22 6
655 121.39 atmosphere 995.0 90 > th dose independent rect. 22 6
656 121.39 radiation 1.0 90 < th dose independent rect. 22 6
662 121.39 temperature 10.0 90 > th dose independent rect. 4 18
663 121.39 atmosphere 1015.0 90 < th dose independent rect. 4 18
666 121.39 radiation 1.0 90 < th dose dependent rect. 22 6
671 121.40 radiation 1.0 270 > th dose independent rect. 7 10
688 121.43 humidity 80.0 270 > th dose independent rect. 16 10
692 121.44 wind 7.0 720 > th dose independent rect. 12 1
696 121.45 radiation 1.0 30 < th dose dependent rect. 22 16
710 121.47 precipitation 0.1 270 < th dose independent rect. 2 19
711 121.47 wind 7.0 30 > th dose dependent sin 15 NA
716 121.47 precipitation 0.1 270 < th dose dependent rect. 2 19
723 121.48 radiation 40.0 90 < th dose dependent rect. 13 10
725 121.49 humidity 90.0 90 > th dose independent rect. 14 14
734 121.50 radiation 10.0 270 < th dose independent rect. 13 18
796 121.54 atmosphere 1015.0 90 < th dose independent rect. 22 6
811 121.55 atmosphere 1015.0 90 < th dose independent rect. 7 22
872 121.60 temperature 20.0 90 > th dose independent rect. 22 6
894 121.64 precipitation 0.1 90 < th dose independent rect. 22 6
895 121.64 wind 9.0 10 > th dose independent rect. 13 9
926 121.64 precipitation 0.1 90 < th dose dependent rect. 22 6
941 121.65 temperature 10.0 270 > th dose independent rect. 2 19
950 121.65 wind 7.0 270 > th dose dependent rect. 11 13
969 121.67 radiation 40.0 90 < th dose dependent rect. 4 19
984 121.69 wind 1.0 270 > th dose independent rect. 7 10