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Os04g0525900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Major facilitator superfamily protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0186) R2 : 0.588
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.19 (0.0467) R2dC : 0.583 R2C : 0.576
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.124 (0.0392) R2dN8 : 0.0116 R2N8 : 0.00517
σ : 0.351
deviance : 56.37
__
_____
C
peak time of C : 15.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.49 0.272 12 -0.529 1.11 -0.673 -0.0731 0.0357 0.163 15.6 39.52 1261 -- --
33.48 0.269 12 -0.541 1.11 -0.677 -0.0906 -- 0.166 15.6 38.61 1259 -- --
33.49 0.27 12 -0.531 1.1 -0.674 -- 0.046 0.158 15.6 38.31 1259 -- --
33.48 0.269 12 -0.537 1.1 -0.664 -- -- 0.167 15.6 37.92 1259 -- --
100.25 0.466 12 -0.583 -- -0.86 -- -0.101 0.152 -- 37.02 1272 -- --
47.2 0.322 12 -0.588 1.17 -- -0.0587 -- 0.0583 15.3 -- -- -- --
47.21 0.322 12 -0.59 1.17 -- -- -- 0.058 15.3 -- -- -- --
99.53 0.465 11.9 -0.443 -- -0.797 -- -- 0.228 -- 19.93 1279 -- --
40.95 0.298 12 -- 1.11 -0.697 -- -- 0.237 15.6 37.12 1259 -- --
125.17 0.523 12 -0.639 -- -- -- -- 0.0271 -- -- -- -- --
56.37 0.351 12 -- 1.19 -- -- -- 0.124 15.3 -- -- -- --
106.04 0.48 11.9 -- -- -0.794 -- -- 0.235 -- 20 1292 -- --
135.95 0.544 12 -- -- -- -- -- 0.098 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.97 humidity 60.0 90 > th dose dependent rect. 7 20
3 32.17 precipitation 0.1 270 < th dose independent rect. 15 14
4 32.17 precipitation 0.1 270 < th dose dependent rect. 15 14
5 32.18 radiation 1.0 270 < th dose independent rect. 5 21
6 32.30 radiation 1.0 270 < th dose dependent rect. 5 21
7 32.39 humidity 60.0 90 > th dose dependent rect. 21 6
10 32.58 humidity 50.0 270 > th dose dependent rect. 19 6
13 32.61 humidity 60.0 90 > th dose dependent rect. 9 18
14 32.62 humidity 50.0 90 > th dose dependent rect. 13 14
15 32.63 precipitation 0.1 270 < th dose independent rect. 1 18
16 32.63 precipitation 0.1 270 < th dose dependent rect. 1 18
17 32.65 wind 9.0 270 < th dose independent rect. 5 10
20 32.67 temperature 10.0 270 > th dose independent rect. 5 10
21 32.67 atmosphere 1015.0 270 < th dose independent rect. 5 10
22 32.67 temperature 10.0 270 > th dose independent rect. 15 14
23 32.70 radiation 40.0 270 < th dose independent rect. 15 14
24 32.73 humidity 60.0 90 > th dose dependent rect. 19 8
29 32.79 atmosphere 995.0 270 > th dose independent rect. 5 10
30 32.79 wind 9.0 270 < th dose independent rect. 15 14
31 32.81 precipitation 0.1 90 < th dose independent rect. 3 18
32 32.81 precipitation 0.1 90 < th dose dependent rect. 3 18
37 32.92 wind 5.0 90 < th dose dependent rect. 3 4
39 32.93 wind 3.0 90 < th dose independent rect. 3 4
40 32.97 wind 5.0 270 < th dose independent rect. 1 5
41 32.99 precipitation 0.1 270 < th dose independent rect. 5 10
42 32.99 precipitation 0.1 270 < th dose dependent rect. 5 10
47 33.04 radiation 30.0 1440 > th dose dependent rect. 13 20
48 33.07 humidity 50.0 270 > th dose dependent rect. 11 14
49 33.07 humidity 60.0 90 > th dose dependent rect. 11 16
51 33.13 radiation 40.0 1440 > th dose independent rect. 13 20
54 33.15 temperature 10.0 90 > th dose dependent rect. 3 18
61 33.22 humidity 60.0 10 > th dose dependent rect. 7 21
71 33.27 temperature 10.0 90 > th dose independent rect. 21 6
72 33.27 temperature 30.0 90 < th dose independent rect. 21 6
73 33.27 humidity 50.0 90 > th dose independent rect. 21 6
76 33.27 atmosphere 995.0 90 > th dose independent rect. 21 6
77 33.27 radiation 1.0 90 < th dose independent rect. 21 6
82 33.27 temperature 10.0 90 > th dose independent rect. 3 18
83 33.27 atmosphere 1015.0 90 < th dose independent rect. 3 18
84 33.27 radiation 1.0 90 < th dose dependent rect. 21 6
90 33.28 wind 9.0 90 < th dose independent rect. 21 6
94 33.32 humidity 70.0 270 > th dose independent rect. 19 6
101 33.36 radiation 40.0 1440 > th dose independent rect. 13 2
109 33.39 radiation 30.0 1440 > th dose dependent rect. 13 3
126 33.41 precipitation 0.1 90 < th dose independent rect. 21 6
128 33.41 precipitation 0.1 90 < th dose dependent rect. 21 6
151 33.46 radiation 40.0 1440 > th dose independent sin 13 NA
156 33.48 precipitation 0.1 270 < th dose independent rect. 2 3
158 33.48 precipitation 0.1 270 < th dose dependent rect. 2 3
160 33.49 wind 9.0 90 < th dose independent rect. 3 18
165 33.53 radiation 40.0 1440 > th dose dependent sin 13 NA
168 33.54 precipitation 0.1 270 < th dose independent rect. 1 5
169 33.54 precipitation 0.1 270 < th dose dependent rect. 1 5
172 33.58 wind 9.0 270 < th dose dependent rect. 1 5
173 33.59 temperature 10.0 270 > th dose independent rect. 19 6
174 33.59 temperature 30.0 270 < th dose independent rect. 19 6
176 33.59 atmosphere 995.0 270 > th dose independent rect. 19 6
177 33.59 radiation 1.0 270 < th dose independent rect. 19 6
182 33.59 temperature 10.0 270 > th dose independent rect. 1 18
183 33.59 atmosphere 1015.0 270 < th dose independent rect. 1 18
186 33.59 radiation 1.0 270 < th dose dependent rect. 19 6
192 33.60 wind 9.0 270 < th dose independent rect. 19 6
254 33.77 wind 9.0 270 < th dose independent rect. 1 18
256 33.79 wind 9.0 90 < th dose dependent rect. 21 6
262 33.81 humidity 80.0 90 > th dose independent rect. 7 20
272 33.88 wind 5.0 90 < th dose dependent rect. 3 6
311 33.97 radiation 40.0 1440 < th dose independent rect. 13 20
333 34.03 humidity 50.0 10 > th dose dependent rect. 21 7
335 34.03 temperature 10.0 10 > th dose dependent rect. 4 17
369 34.10 wind 3.0 90 < th dose independent rect. 3 6
374 34.10 radiation 1.0 270 < th dose dependent rect. 11 14
391 34.15 radiation 40.0 1440 < th dose independent sin 13 NA
401 34.19 radiation 40.0 1440 < th dose independent rect. 13 2
403 34.19 atmosphere 995.0 270 > th dose independent rect. 15 14
404 34.19 radiation 40.0 1440 < th dose independent rect. 13 15
405 34.19 precipitation 0.1 10 < th dose independent rect. 4 17
406 34.19 atmosphere 995.0 270 > th dose independent rect. 1 18
407 34.19 wind 9.0 90 < th dose independent rect. 7 20
408 34.19 precipitation 0.1 10 < th dose dependent rect. 4 17
411 34.20 radiation 1.0 270 < th dose independent rect. 10 15
419 34.21 temperature 10.0 90 > th dose dependent rect. 3 4
422 34.22 temperature 10.0 90 > th dose independent rect. 3 4
424 34.22 temperature 30.0 90 < th dose independent rect. 3 4
425 34.22 humidity 50.0 90 > th dose independent rect. 3 4
427 34.22 atmosphere 995.0 90 > th dose independent rect. 3 4
428 34.22 atmosphere 1015.0 90 < th dose independent rect. 3 4
429 34.22 radiation 30.0 90 < th dose independent rect. 3 4
433 34.22 temperature 10.0 90 > th dose independent rect. 7 20
464 34.28 atmosphere 995.0 90 > th dose independent rect. 3 18
467 34.29 temperature 10.0 270 > th dose independent rect. 1 5
469 34.29 temperature 30.0 270 < th dose independent rect. 1 5
470 34.29 humidity 50.0 270 > th dose independent rect. 1 5
473 34.29 atmosphere 995.0 270 > th dose independent rect. 1 5
474 34.29 atmosphere 1015.0 270 < th dose independent rect. 1 5
475 34.29 radiation 20.0 270 < th dose independent rect. 1 5
484 34.30 wind 9.0 270 < th dose independent rect. 5 21
487 34.31 humidity 50.0 270 > th dose independent rect. 6 19
524 34.35 radiation 1.0 270 < th dose independent rect. 2 3
532 34.35 temperature 10.0 270 > th dose independent rect. 5 21
534 34.35 radiation 20.0 270 < th dose dependent rect. 2 3
542 34.36 humidity 80.0 90 > th dose independent rect. 9 18
553 34.39 humidity 50.0 270 > th dose independent rect. 6 9
561 34.40 humidity 70.0 270 > th dose independent rect. 11 14
563 34.40 radiation 20.0 1440 > th dose independent rect. 13 21
575 34.42 radiation 40.0 270 < th dose dependent rect. 1 5
577 34.42 temperature 10.0 270 > th dose dependent rect. 1 19
588 34.44 humidity 60.0 90 > th dose dependent rect. 17 10
627 34.51 temperature 10.0 90 > th dose dependent rect. 21 6
657 34.54 radiation 20.0 1440 > th dose independent sin 12 NA
717 34.59 humidity 50.0 90 > th dose dependent rect. 3 4
718 34.59 temperature 10.0 270 > th dose dependent rect. 1 5
721 34.60 wind 9.0 10 < th dose independent rect. 21 7
722 34.60 temperature 10.0 10 > th dose independent rect. 21 7
723 34.60 temperature 30.0 10 < th dose independent rect. 21 7
724 34.60 humidity 50.0 10 > th dose independent rect. 21 7
727 34.60 atmosphere 995.0 10 > th dose independent rect. 21 7
728 34.60 radiation 1.0 10 < th dose independent rect. 21 7
733 34.60 temperature 10.0 10 > th dose independent rect. 4 17
735 34.60 atmosphere 1015.0 10 < th dose independent rect. 4 17
738 34.60 radiation 1.0 10 < th dose dependent rect. 21 7
761 34.64 humidity 70.0 270 > th dose independent rect. 13 12
781 34.67 radiation 40.0 1440 > th dose dependent rect. 8 7
801 34.68 radiation 40.0 1440 > th dose dependent no NA NA