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Os04g0525700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Serine carboxypeptidase II precursor (EC 3.4.16.6) (Carboxypeptidase D) (Bri1 suppressor 1) [Contains: Serine carboxypeptidase II chain A; Serine carboxypeptidase II chain B].


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.93 (0.0343) R2 : 0.635
β1 : 1.41 (0.136) R2dD : 0.103 R2D : 0.0592
β2 : 1.08 (0.082) R2dC : 0.144 R2C : 0.02
β3 : -1.81 (0.146) R2dE : 0.157 R2E : 0.0573
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.43 (0.0737) R2dN8 : 0.406 R2N8 : 0.157
σ : 0.64
deviance : 188.67
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_____
C
peak time of C : 23.4
E
wheather : wind
threshold : 4.519
memory length : 12093
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 14.4
open length of G : 2.28

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
176.21 0.624 5.89 1.51 0.979 -1.66 1.93 -1.38 1.42 0.496 4.931 11512 14.1 2.12
177.57 0.621 5.91 1.5 1.05 -1.89 2 -- 1.44 0.324 4.717 11229 14.4 2.3
186.42 0.636 5.91 1.49 1.06 -1.75 -- -1.43 1.39 23.4 4.62 12096 14.3 1.98
188.67 0.64 5.93 1.41 1.08 -1.81 -- -- 1.43 23.4 4.519 12093 14.4 2.28
250.17 0.737 5.89 1.49 -- -1.91 -- -1.29 1.4 -- 4.9 10222 14.5 2.22
236.03 0.72 5.95 2.13 0.956 -- 2.09 -- 1.29 0.673 -- -- -- --
253.23 0.745 5.96 2.05 0.959 -- -- -- 1.29 0.0282 -- -- -- --
253.77 0.742 5.93 1.42 -- -1.76 -- -- 1.39 -- 4.599 11552 14.5 2.34
223.31 0.696 5.91 -- 1.15 -2.56 -- -- 1.25 22.8 5.231 12081 14.7 3.82
311.16 0.824 5.94 2.08 -- -- -- -- 1.3 -- -- -- -- --
364.16 0.893 6.01 -- 0.987 -- -- -- 1.06 0.146 -- -- -- --
282.09 0.782 5.96 -- -- -2.99 -- -- 0.967 -- 4.899 43057 16.6 2.12
425.44 0.963 5.99 -- -- -- -- -- 1.07 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 179.79 humidity 80 14400 > th dose independent rect. 21 2
2 180.25 atmosphere 1000 270 > th dose independent rect. 7 22
6 183.14 wind 7 14400 > th dose dependent rect. 13 3
10 183.92 wind 9 14400 > th dose dependent rect. 13 7
13 184.58 atmosphere 1000 90 > th dose independent rect. 9 21
22 185.32 atmosphere 1000 90 > th dose independent rect. 9 10
24 185.35 wind 9 14400 > th dose dependent rect. 13 16
36 185.46 wind 9 14400 > th dose independent rect. 14 2
37 185.46 humidity 80 14400 < th dose independent rect. 21 2
39 185.61 wind 9 14400 > th dose dependent rect. 18 22
40 185.66 humidity 80 14400 < th dose dependent rect. 20 2
45 185.87 atmosphere 1000 270 > th dose independent rect. 7 11
49 186.00 wind 9 14400 < th dose independent rect. 14 2
50 186.10 wind 9 14400 > th dose independent rect. 13 8
55 186.37 wind 5 4320 > th dose independent rect. 14 1
60 186.72 wind 5 4320 < th dose independent rect. 14 1
70 187.14 wind 9 14400 > th dose independent rect. 13 12
71 187.14 wind 9 14400 > th dose independent rect. 13 16
83 187.32 atmosphere 1000 10 > th dose independent rect. 10 20
103 187.61 temperature 30 4320 < th dose independent rect. 10 4
111 187.69 temperature 30 4320 < th dose independent rect. 4 10
119 187.75 temperature 30 4320 < th dose independent rect. 6 8
127 187.87 temperature 30 4320 < th dose independent rect. 20 18
151 188.25 wind 9 14400 < th dose independent rect. 13 7
152 188.26 wind 9 14400 > th dose dependent sin 21 NA
165 188.63 wind 9 14400 > th dose independent rect. 18 22
196 188.96 temperature 30 4320 > th dose independent rect. 10 4
221 189.21 wind 1 43200 > th dose independent rect. 4 2
223 189.24 wind 9 14400 > th dose dependent rect. 5 16
231 189.31 wind 9 14400 > th dose dependent rect. 3 18
235 189.35 wind 9 14400 > th dose dependent rect. 24 21
290 189.98 wind 9 14400 > th dose dependent rect. 5 20
302 190.03 wind 5 14400 > th dose independent rect. 11 6
314 190.07 wind 9 14400 > th dose dependent rect. 5 23
331 190.13 wind 7 14400 > th dose dependent rect. 3 14
353 190.17 wind 9 14400 > th dose dependent no NA NA
363 190.20 wind 7 14400 > th dose dependent rect. 24 17
377 190.38 wind 9 14400 > th dose independent sin 20 NA
379 190.41 wind 9 14400 < th dose independent rect. 13 17
386 190.44 wind 5 14400 < th dose independent rect. 11 6
417 190.73 wind 9 14400 > th dose independent rect. 5 16
423 190.77 wind 9 14400 > th dose independent rect. 3 18
427 190.79 wind 9 14400 > th dose independent rect. 24 21
465 191.15 wind 9 14400 < th dose independent rect. 11 10
468 191.20 temperature 30 4320 < th dose independent sin 7 NA
534 191.63 wind 9 14400 > th dose independent rect. 5 20
542 191.69 temperature 30 4320 > th dose independent rect. 13 1
567 191.73 wind 9 14400 > th dose independent rect. 5 23
583 191.77 wind 1 43200 > th dose independent rect. 2 5
622 191.84 wind 9 14400 > th dose independent no NA NA
630 191.85 wind 7 14400 > th dose independent rect. 3 14
652 192.04 wind 7 14400 > th dose independent rect. 24 17
669 192.21 wind 9 14400 < th dose independent rect. 11 19
754 192.72 wind 5 4320 > th dose independent rect. 14 7
772 192.86 wind 7 14400 < th dose independent rect. 3 14
799 193.03 wind 9 14400 < th dose independent rect. 18 22
804 193.07 wind 1 43200 < th dose dependent rect. 2 5
810 193.09 wind 7 14400 < th dose independent rect. 24 17
826 193.19 atmosphere 1000 720 > th dose independent rect. 24 19
833 193.22 wind 9 14400 < th dose dependent rect. 12 3
882 193.63 atmosphere 1000 720 > th dose independent rect. 19 20
885 193.65 wind 5 4320 < th dose independent rect. 14 7
890 193.68 temperature 30 4320 > th dose independent sin 7 NA
954 193.99 wind 9 14400 < th dose independent sin 20 NA
959 194.00 wind 1 43200 < th dose independent rect. 2 5